RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 SYNDIG1LA6NDD5 238 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 MEIS1O00470 390 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 CHL1O00533 1208 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 DDIT3P35638 169 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 SEPT2Q15019 361 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 SUPT20HL1Q3ZLR7 823 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 EDEM3Q9BZQ6 932 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 RWDD2AQ9UIY3 292 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 ZNF804BA4D1E1 1349 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 KPNA7A9QM74 516 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 EIF4A1P60842 406 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 ALCAMQ13740 583 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 SYDE2Q5VT97 1194 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 GTSE1Q9NYZ3 720 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 FGAP02671 866 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 HOXA7P31268 230 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 GOLGA8FQ08AF8 430 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 GOLGA8DPQ0D2H9 430 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 RBBP7Q16576 425 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 ERICH1Q86X53 443 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 FMO2Q99518 471 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 SLC7A5P2Q9GIP4 190 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 DIS3Q9Y2L1 958 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 ATP10AO60312 1499 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 SERPINB2P05120 415 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 MYL3P08590 195 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 PSMD2Q13200 908 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 TMEM60Q9H2L4 133 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 MTMR6Q9Y217 621 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 COPEO14579 308 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 ZNF500O60304 480 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 DAB2P98082 770 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 CEP70Q8NHQ1 597 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 SLC26A7Q8TE54 656 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 STRIP2Q9ULQ0 834 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 COL17A1Q9UMD9 1497 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 MYL1P05976 194 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 MSTO1Q9BUK6 570 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 FAM96AQ9H5X1 160 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 PARVGQ9HBI0 331 aa13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 APOBEC2Q9Y235 224 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-219ENST00000399649 XDHP47989 1333 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 KRT8P05787 483 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 TRIM60Q495X7 471 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 PDIK1LQ8N165 341 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 SLITRK6Q9H5Y7 841 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 YY1AP1Q9H869 796 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 BICRAQ9NZM4 1560 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 TMPRSS15P98073 1019 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 TAGAPQ8N103 731 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 OR6B3Q8NGW1 331 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 ASPSCR1Q9BZE9 553 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 LCMT1Q9UIC8 334 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 A0A1W2PQ27 194 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 A0A1W2PQ64 194 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 ZNF263O14978 683 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 NR1D1P20393 614 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 AARSP49588 968 aaKnown RBP eCLIP13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 SPARCL1Q14515 664 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 LBRQ14739 615 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 CDC37Q16543 378 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 RASSF3Q86WH2 238 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 WDR75Q8IWA0 830 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 STX19Q8N4C7 294 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 AP1M1Q9BXS5 423 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 GSPT1P15170 499 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 HDAC4P56524 1084 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 COPS2P61201 443 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 CUL1Q13616 776 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 POLIQ9UNA4 740 aa13.19□□□□□ -0.3
CACNA1C-219ENST00000399649 KRT4P19013 534 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 CA4P22748 312 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 MXI1P50539 228 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 RWDD2BP57060 319 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 RGS9BPQ6ZS82 235 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 TTC17Q96AE7 1141 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 ZFYVE19Q96K21 471 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 QTRT2Q9H974 415 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 CARMIL3Q8ND23 1372 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 RGS12O14924 1447 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 BLMP54132 1417 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 HDLBPQ00341 1268 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 LLGL1Q15334 1064 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 SLFN12LQ6IEE8 588 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 HIPK4Q8NE63 616 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 RBM46Q8TBY0 533 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 ULK4Q96C45 1275 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 KLHL8Q9P2G9 620 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 A0A087WUV0 522 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms