RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	ZNF304	Q9HCX3	659 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	C1orf112	Q9NSG2	853 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SRP68	Q9UHB9	627 aa	Known RBP	11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	RAB23	Q9ULC3	237 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	NR2E3	Q9Y5X4	410 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	IL16	Q14005	1332 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	MTX1	Q13505	466 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	C11orf96	Q7Z7L8	435 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SLFN12	Q8IYM2	578 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	C8orf58	Q8NAV2	365 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	APPBP2	Q92624	585 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	EFHD1	Q9BUP0	239 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ELP3	Q9H9T3	547 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ASAP2	O43150	1006 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SKAP2	O75563	359 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SLC16A1	P53985	500 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	CSE1L	P55060	971 aa	Known RBP	11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	RWDD4	Q6NW29	188 aa	Known RBP	11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SCN4B	Q8IWT1	228 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	TRMT44	Q8IYL2	757 aa	Known RBP	11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	LRRC4	Q9HBW1	653 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SELENON	Q9NZV5	590 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SPDYE5	A6NIY4	337 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	LRRC74A	Q0VAA2	488 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	DRP2	Q13474	957 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	BFSP2	Q13515	415 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	CNGA2	Q16280	664 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	NELFB	Q8WX92	580 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	GJD4	Q96KN9	370 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ADNP	Q9H2P0	1102 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ATP6V0A4	Q9HBG4	840 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	HOXC10	Q9NYD6	342 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	GTSE1	Q9NYZ3	720 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ATP8A1	Q9Y2Q0	1164 aa		11.94	□□□□□ -0.5
CACNA1C-218	ENST00000399644	TTC41P	Q6P2S7	1318 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	KDM3A	Q9Y4C1	1321 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	CAVIN2	O95810	425 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	PLS3	P13797	630 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SDS	P20132	328 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	MTERF2	Q49AM1	385 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	PBXIP1	Q96AQ6	731 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	MRPS26	Q9BYN8	205 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	USP17L12	C9JPN9	530 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	USP17L21	D6R901	530 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644		H0Y3Z8	333 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SEMA3E	O15041	775 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	TSPAN9	O75954	239 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	STAT2	P52630	851 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	RBBP4	Q09028	425 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	STXBP2	Q15833	593 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	MFSD4B	Q5TF39	518 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ALKBH2	Q6NS38	261 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	CYP4F22	Q6NT55	531 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	RRM2B	Q7LG56	351 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.93	□□□□□ -0.5	2e-6	■■■■■ 45.2
CACNA1C-218	ENST00000399644	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	OSTN	P61366	133 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	PRKCQ	Q04759	706 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	MYO1E	Q12965	1108 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	TRIM71	Q2Q1W2	868 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	NBPF9	Q3BBW0	867 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ADAL	Q6DHV7	355 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	CCDC149	Q6ZUS6	474 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	GRK7	Q8WTQ7	553 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	TSC22D3	Q99576	134 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ZNF577	Q9BSK1	485 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	POLR2D	O15514	142 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SNX2	O60749	519 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	RPN1	P04843	607 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	CBFB	Q13951	182 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	CEP55	Q53EZ4	464 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	TCP11X2	Q5H9J9	407 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	DHX32	Q7L7V1	743 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SIX6OS1	Q8N1H7	587 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	CCDC17	Q96LX7	622 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	TMEM161A	Q9NX61	479 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	TLK1	Q9UKI8	766 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SASH1	O94885	1247 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ZAP70	P43403	619 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	PPARA	Q07869	468 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	INPP5D	Q92835	1189 aa		11.93	□□□□□ -0.5
CACNA1C-218	ENST00000399644	FCER1A	P12319	257 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	MAGEA1	P43355	309 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ATP12A	P54707	1039 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SNAP25	P60880	206 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	TRIM25	Q14258	630 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	SPDYE7P	Q495Y7	208 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	CABP7	Q86V35	215 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	MAP3K20	Q9NYL2	800 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ITGAX	P20702	1163 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ADK	P55263	362 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ZSCAN26	Q16670	478 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	TTC38	Q5R3I4	469 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	OR9Q1	Q8NGQ5	310 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	AFG1L	Q8WV93	481 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	NUDCD1	Q96RS6	583 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	NT5C3A	Q9H0P0	336 aa		11.92	□□□□□ -0.5
CACNA1C-218	ENST00000399644	ZMYND10	O75800	440 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms