RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 CCT5P48643 541 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 SYCE1Q8N0S2 351 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 NLRP4Q96MN2 994 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 SH3GL1Q99961 368 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 CUL7Q14999 1698 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 ARHGAP17Q68EM7 881 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 ST13P5Q8NFI4 369 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 CAPS2Q9BXY5 557 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 RAB17Q9H0T7 212 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 ZNF304Q9HCX3 659 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 C1orf112Q9NSG2 853 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 SRP68Q9UHB9 627 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 RAB23Q9ULC3 237 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 NR2E3Q9Y5X4 410 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 IL16Q14005 1332 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 MTX1Q13505 466 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 C11orf96Q7Z7L8 435 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 SLFN12Q8IYM2 578 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 C8orf58Q8NAV2 365 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 APPBP2Q92624 585 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 EFHD1Q9BUP0 239 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 ELP3Q9H9T3 547 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 ASAP2O43150 1006 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 SKAP2O75563 359 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 SLC16A1P53985 500 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 CSE1LP55060 971 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 RWDD4Q6NW29 188 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 SCN4BQ8IWT1 228 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 TRMT44Q8IYL2 757 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 LRRC4Q9HBW1 653 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 SELENONQ9NZV5 590 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 SPDYE5A6NIY4 337 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 LRRC74AQ0VAA2 488 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 DRP2Q13474 957 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 BFSP2Q13515 415 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 CNGA2Q16280 664 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 NELFBQ8WX92 580 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 GJD4Q96KN9 370 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 ADNPQ9H2P0 1102 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 ATP6V0A4Q9HBG4 840 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 GTSE1Q9NYZ3 720 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 ATP8A1Q9Y2Q0 1164 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 TTC41PQ6P2S7 1318 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 KDM3AQ9Y4C1 1321 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 CAVIN2O95810 425 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 PLS3P13797 630 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 SDSP20132 328 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 MTERF2Q49AM1 385 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 CCSAPQ6IQ19 270 aaPredicted RBP11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 PBXIP1Q96AQ6 731 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 MRPS26Q9BYN8 205 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 USP17L21D6R901 530 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 H0Y3Z8 333 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 SEMA3EO15041 775 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 TSPAN9O75954 239 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 STAT2P52630 851 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 RBBP4Q09028 425 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 STXBP2Q15833 593 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 MFSD4BQ5TF39 518 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 ALKBH2Q6NS38 261 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 CYP4F22Q6NT55 531 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 RRM2BQ7LG56 351 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.93□□□□□ -0.52e-6■■■■■ 45.2
CACNA1C-217ENST00000399641 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 OSTNP61366 133 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 PRKCQQ04759 706 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 MYO1EQ12965 1108 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 TRIM71Q2Q1W2 868 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 NBPF9Q3BBW0 867 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 ADALQ6DHV7 355 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 CCDC149Q6ZUS6 474 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 GRK7Q8WTQ7 553 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 TSC22D3Q99576 134 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 ZNF577Q9BSK1 485 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 POLR2DO15514 142 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 SNX2O60749 519 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 CBFBQ13951 182 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 CEP55Q53EZ4 464 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 TCP11X2Q5H9J9 407 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 DHX32Q7L7V1 743 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 SIX6OS1Q8N1H7 587 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 CCDC17Q96LX7 622 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 TMEM161AQ9NX61 479 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 TLK1Q9UKI8 766 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 SASH1O94885 1247 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 ZAP70P43403 619 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 PPARAQ07869 468 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 INPP5DQ92835 1189 aa11.93□□□□□ -0.5
CACNA1C-217ENST00000399641 FCER1AP12319 257 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 MAGEA1P43355 309 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 ATP12AP54707 1039 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 SNAP25P60880 206 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 TRIM25Q14258 630 aaKnown RBP11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 SPDYE7PQ495Y7 208 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 CABP7Q86V35 215 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 ST13P4Q8IZP2 240 aaPredicted RBP11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 MAP3K20Q9NYL2 800 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms