RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 CARD6Q9BX69 1037 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 CD209Q9NNX6 404 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 TTI1O43156 1089 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 TRAPPC3O43617 180 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 CYP2E1P05181 493 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 C6orf222P0C671 652 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 PSMA2P25787 234 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 NAA35Q5VZE5 725 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 KCNV1Q6PIU1 500 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 SPATA2LQ8IUW3 424 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 ZNRF3Q9ULT6 936 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 SPATA31A6Q5VVP1 1343 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 STAT3P40763 770 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 GTF2H3Q13889 308 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 TRIM67Q6ZTA4 783 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 NDUFAB1O14561 156 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 PRRG1O14668 218 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 PDIA3P30101 505 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 MCPH1Q8NEM0 835 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 TBC1D22BQ9NU19 505 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 CLIC4Q9Y696 253 aa12.99□□□□□ -0.33
CACNA1C-213ENST00000399629 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 ASMTLO95671 621 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 SEPT2Q15019 361 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 SWSAP1Q6NVH7 229 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 KSR1Q8IVT5 923 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 SRRM1Q8IYB3 904 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 SPDL1Q96EA4 605 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 FAM196BA6NMK8 535 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 COBLO75128 1261 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 APOEP02649 317 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 GNL1P36915 607 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 SCARF1Q14162 830 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 TRIM45Q9H8W5 580 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 ZC3H4Q9UPT8 1303 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 GFPT2O94808 682 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 ZBED1O96006 694 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 PAPOLAP51003 745 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 TSNAXIP1Q2TAA8 658 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 RCSD1Q6JBY9 416 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 SP8Q8IXZ3 490 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 EFHBQ8N7U6 833 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 SH3TC2Q8TF17 1288 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 LZICQ8WZA0 190 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 ZNF668Q96K58 619 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 CETPP11597 493 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 SGO2Q562F6 1265 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 TEKT4Q8WW24 435 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 CTSHP09668 335 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 HMGCS2P54868 508 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 RASSF7Q02833 373 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 LRRC43Q8N309 656 aa12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-213ENST00000399629 KRT76Q01546 638 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 UHMK1Q8TAS1 419 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 ZKSCAN5Q9Y2L8 839 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 KRT17Q04695 432 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 PRKCQQ04759 706 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 WASHC5Q12768 1159 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 HLFQ16534 295 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 RABEP2Q9H5N1 569 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 TLR7Q9NYK1 1049 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 PCDHB8Q9UN66 801 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 PIN4Q9Y237 131 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 USP6P35125 1406 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 CCL15-CCL14A0A0B4J2E2 113 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 PRPF4O43172 522 aaKnown RBP eCLIP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 OCM2P0CE71 109 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 OCMP0CE72 109 aaPredicted RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 MTMR2Q13614 643 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 TAF11Q15544 211 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 CCL15Q16663 113 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 ZNF827Q17R98 1081 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 PPP1R12CQ9BZL4 782 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 EDEM3Q9BZQ6 932 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 COG4Q9H9E3 785 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 AAASQ9NRG9 546 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 CREB3O43889 395 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 TXNP10599 105 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 LRRC8CQ8TDW0 803 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 DHTKD1Q96HY7 919 aaPredicted RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 RNF123Q5XPI4 1314 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 E5RI56 91 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 MOCS2O96007 188 aaPredicted RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 CMA1P23946 247 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 MSH2P43246 934 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 FBXL13Q8NEE6 735 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 P2RX5Q93086 422 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 MRPL4Q9BYD3 311 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 SARS2Q9NP81 518 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 NGRNQ9NPE2 291 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 SYNDIG1LA6NDD5 238 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 IKBKBO14920 756 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 ZBTB5O15062 677 aa12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 SART1O43290 800 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-213ENST00000399629 ADORA2BP29275 332 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms