RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 NFIXQ14938 502 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 CYFIP1Q7L576 1253 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 UTYO14607 1347 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 TMEM47Q9BQJ4 181 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 OAS2P29728 719 aaKnown RBP12.25□□□□□ -0.45
TTC28-201ENST00000397906 ASPHQ12797 758 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 TAF1CQ15572 869 aaPredicted RBP12.25□□□□□ -0.45
TTC28-201ENST00000397906 SZRD1Q7Z422 152 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 ADGRF4Q8IZF3 695 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 MXD3Q9BW11 206 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 TBK1Q9UHD2 729 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
TTC28-201ENST00000397906 PSMA2P25787 234 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 EEF1GP26641 437 aaKnown RBP12.25□□□□□ -0.45
TTC28-201ENST00000397906 CACNB2Q08289 660 aaPredicted RBP12.25□□□□□ -0.45
TTC28-201ENST00000397906 DEPDC1BQ8WUY9 529 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 OGFRQ9NZT2 677 aa12.25□□□□□ -0.45
TTC28-201ENST00000397906 NVLO15381 856 aaKnown RBP12.24□□□□□ -0.45
TTC28-201ENST00000397906 CREB3O43889 395 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 ZNF667Q5HYK9 610 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 HP1BP3Q5SSJ5 553 aaPredicted RBP12.24□□□□□ -0.45
TTC28-201ENST00000397906 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
TTC28-201ENST00000397906 GPT2Q8TD30 523 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 FAM213AQ9BRX8 229 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 RECQLP46063 649 aaPredicted RBP12.24□□□□□ -0.45
TTC28-201ENST00000397906 ARHGAP4P98171 946 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 ZNF699Q32M78 642 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 GJB4Q9NTQ9 266 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 CNOT7Q9UIV1 285 aaKnown RBP12.24□□□□□ -0.45
TTC28-201ENST00000397906 ABCC3O15438 1527 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 PPFIA4O75335 1185 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 NGRNQ9NPE2 291 aaKnown RBP12.24□□□□□ -0.45
TTC28-201ENST00000397906 TOPORSQ9NS56 1045 aaPredicted RBP12.24□□□□□ -0.45
TTC28-201ENST00000397906 PRDM15P57071 1507 aaPredicted RBP12.24□□□□□ -0.45
TTC28-201ENST00000397906 ADRA2BP18089 450 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 CEP120Q8N960 986 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 N4BP2L2Q92802 583 aaPredicted RBP12.24□□□□□ -0.45
TTC28-201ENST00000397906 GPC3P51654 580 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 PRELPP51888 382 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 MAN2A1Q16706 1144 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 DCAF4L1Q3SXM0 396 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 BRIP1Q9BX63 1249 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 FAM8A1Q9UBU6 413 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 CTSHP09668 335 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 NME3Q13232 169 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 SLFN12LQ6IEE8 588 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 LRRC8AQ8IWT6 810 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 DYDC2Q96IM9 177 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 FKBP3Q00688 224 aaKnown RBP12.24□□□□□ -0.45
TTC28-201ENST00000397906 GLYCTKQ8IVS8 523 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 FAM71BQ8TC56 605 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 IFT122Q9HBG6 1241 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 POLR3EQ9NVU0 708 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 PTCH1Q13635 1447 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 ZMYND10O75800 440 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 SESN3P58005 492 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 TMED2Q15363 201 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 ERICH1Q86X53 443 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 HACL1Q9UJ83 578 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 STAT3P40763 770 aa12.24□□□□□ -0.45
TTC28-201ENST00000397906 C10orf76Q5T2E6 689 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 POLR3FQ9H1D9 316 aaPredicted RBP12.23□□□□□ -0.45
TTC28-201ENST00000397906 ADORA2BP29275 332 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 RCSD1Q6JBY9 416 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 MRPL47Q9HD33 250 aaKnown RBP12.23□□□□□ -0.45
TTC28-201ENST00000397906 SPTLC3Q9NUV7 552 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 H7C1W4 665 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 MOCS2O96007 188 aaPredicted RBP12.23□□□□□ -0.45
TTC28-201ENST00000397906 ANO4Q32M45 955 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 KCTD16Q68DU8 428 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 ANGPTL8Q6UXH0 198 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 CYB5R4Q7L1T6 521 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 HABP4Q5JVS0 413 aaKnown RBP12.23□□□□□ -0.45
TTC28-201ENST00000397906 KBTBD13C9JR72 458 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 WHAMMP3Q1A5X7 153 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 SAMSN1Q9NSI8 373 aaKnown RBP12.23□□□□□ -0.45
TTC28-201ENST00000397906 GPC4O75487 556 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 FAM114A2Q9NRY5 505 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 RCN2Q14257 317 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 ZNF445P59923 1031 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 C2orf54Q08AI8 447 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 SPOPLQ6IQ16 392 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 OR6J1Q8NGC5 347 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 KLHL14Q9P2G3 628 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 INPP5BP32019 993 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 SPDL1Q96EA4 605 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 STRBPQ96SI9 672 aaKnown RBP12.23□□□□□ -0.45
TTC28-201ENST00000397906 MBD5Q9P267 1494 aa12.23□□□□□ -0.45
TTC28-201ENST00000397906 LMNB2Q03252 620 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 LRRC8CQ8TDW0 803 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 PAGE5Q96GU1 130 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 DCP1AQ9NPI6 582 aaPredicted RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 HOMER3Q9NSC5 361 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 PLTPP55058 493 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 LDHAP00338 332 aaKnown RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 AP3B2Q13367 1082 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 SURF1Q15526 300 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 ANGEL2Q5VTE6 544 aaKnown RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 SYNDIG1Q9H7V2 258 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms