RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 YWHABP31946 246 aaKnown RBP26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 MCM6Q14566 821 aa26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 DGKDQ16760 1214 aa26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 GJC2Q5T442 439 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 KCNK18Q7Z418 384 aa26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 AFG1LQ8WV93 481 aa26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 GLG1Q92896 1179 aa26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 ZNF215Q9UL58 517 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 PTPN22Q9Y2R2 807 aa26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 PPME1Q9Y570 386 aa26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 ARHGEF35A5YM69 484 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 A6NJR5 290 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 MMP3P08254 477 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 AFMP43652 599 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 PRKCEQ02156 737 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 UGCGQ16739 394 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 ZSCAN23Q3MJ62 389 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 TMEM63BQ5T3F8 832 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 CKAP2LQ8IYA6 745 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 CCDC47Q96A33 483 aaKnown RBP26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 BHMT2Q9H2M3 363 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 NRBP2Q9NSY0 501 aa26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 WRAP73Q9P2S5 460 aaPredicted RBP26.27■■□□□ 1.8
TSPAN4-202ENST00000397396 OATP04181 439 aa26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 INHAP05111 366 aa26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 SSBP05455 408 aaKnown RBP eCLIP26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 SLC12A3P55017 1021 aa26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 MDM2Q00987 491 aaPredicted RBP26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 CNNM4Q6P4Q7 775 aa26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 PIGOQ8TEQ8 1089 aa26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 LRRC15Q8TF66 581 aa26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 SMARCE1Q969G3 411 aa26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 C7orf25Q9BPX7 421 aa26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 ERAP1Q9NZ08 941 aa26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 KIAA1468Q9P260 1216 aa26.26■■□□□ 1.79
TSPAN4-202ENST00000397396 ADCY6O43306 1168 aa26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 KPNA6O60684 536 aa26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 PSMC6P62333 389 aa26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 TRIM32Q13049 653 aa26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 UTP14CQ5TAP6 766 aaKnown RBP26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 CTU1Q7Z7A3 348 aaKnown RBP26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 PCYT2Q99447 389 aa26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 TRIM9Q9C026 710 aa26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 UPF3AQ9H1J1 476 aaKnown RBP26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 HMX1Q9NP08 348 aaPredicted RBP26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 RMND1Q9NWS8 449 aa26.25■■□□□ 1.79
TSPAN4-202ENST00000397396 FOXN1O15353 648 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 ZNF862O60290 1169 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 ZEB2O60315 1214 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 LGALS2P05162 132 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 HSPA1AP0DMV8 641 aaKnown RBP26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 HSPA1BP0DMV9 641 aaKnown RBP26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 GJA9P57773 515 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 NKX3-2P78367 333 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 DPYDQ12882 1025 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 PNOCQ13519 176 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 DHX8Q14562 1220 aaKnown RBP26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 GPBP1Q86WP2 473 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 BBXQ8WY36 941 aaPredicted RBP26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 GSDMAQ96QA5 445 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 TIPINQ9BVW5 301 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 GTPBP4Q9BZE4 634 aaKnown RBP26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 TELO2Q9Y4R8 837 aa26.24■■□□□ 1.79
TSPAN4-202ENST00000397396 KRT18P05783 430 aaKnown RBP26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 RARRES1P49788 294 aa26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 PKN2Q16513 984 aaKnown RBP26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 SASS6Q6UVJ0 657 aa26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 GRAMD1CQ8IYS0 662 aa26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 TRIML1Q8N9V2 468 aa26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 ATP8B4Q8TF62 1192 aa26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 MTRQ99707 1265 aa26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 GZF1Q9H116 711 aaPredicted RBP26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 SEPT9Q9UHD8 586 aaPredicted RBP26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 DDX20Q9UHI6 824 aaKnown RBP26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 TUBE1Q9UJT0 475 aa26.23■■□□□ 1.79
TSPAN4-202ENST00000397396 CCND3P30281 292 aaPredicted RBP26.22■■□□□ 1.79
TSPAN4-202ENST00000397396 FSCN1Q16658 493 aaKnown RBP26.22■■□□□ 1.79
TSPAN4-202ENST00000397396 XKR9Q5GH70 373 aa26.22■■□□□ 1.79
TSPAN4-202ENST00000397396 NT5DC1Q5TFE4 455 aa26.22■■□□□ 1.79
TSPAN4-202ENST00000397396 EXOC8Q8IYI6 725 aa26.22■■□□□ 1.79
TSPAN4-202ENST00000397396 SPATA20Q8TB22 786 aa26.22■■□□□ 1.79
TSPAN4-202ENST00000397396 XPNPEP3Q9NQH7 507 aa26.22■■□□□ 1.79
TSPAN4-202ENST00000397396 MYH9P35579 1960 aaKnown RBP26.22■■□□□ 1.79
TSPAN4-202ENST00000397396 SYNRGQ9UMZ2 1314 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 SYCE3A1L190 88 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 PRR29P0C7W0 189 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 CYP11B2P19099 503 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 ASIC1P78348 528 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 SLC9C1Q4G0N8 1177 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 ANO5Q75V66 913 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 DDX12PQ92771 950 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 STAMQ92783 540 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 CEP170P1Q96L14 293 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 KATNAL1Q9BW62 490 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 NIFKQ9BYG3 293 aaKnown RBP26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 PCDHA5Q9Y5H7 936 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 WDR81Q562E7 1941 aa26.21■■□□□ 1.79
TSPAN4-202ENST00000397396 PVALEFA0A1B0GWK0 134 aa26.2■■□□□ 1.79
TSPAN4-202ENST00000397396 MYMKA6NI61 221 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms