RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 PPFIA3O75145 1194 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 INSRRP14616 1297 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 GATMP50440 423 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 RBM10P98175 930 aaKnown RBP17.2■□□□□ 0.34
SEC13-206ENST00000397102 PLEKHM2Q8IWE5 1019 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 VN1R2Q8NFZ6 395 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 ZBTB10Q96DT7 871 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 SENP2Q9HC62 589 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 AAASQ9NRG9 546 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 KDM3AQ9Y4C1 1321 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 PROB1E7EW31 1015 aa17.19■□□□□ 0.34
SEC13-206ENST00000397102 SRGAP2BP0DMP2 458 aa17.19■□□□□ 0.34
SEC13-206ENST00000397102 ITGB5P18084 799 aa17.19■□□□□ 0.34
SEC13-206ENST00000397102 SARSP49591 514 aaKnown RBP17.19■□□□□ 0.34
SEC13-206ENST00000397102 TMEM62Q0P6H9 643 aa17.19■□□□□ 0.34
SEC13-206ENST00000397102 WTAPQ15007 396 aa17.19■□□□□ 0.34
SEC13-206ENST00000397102 PDE12Q6L8Q7 609 aaKnown RBP17.19■□□□□ 0.34
SEC13-206ENST00000397102 FAM43BQ6ZT52 329 aaPredicted RBP17.19■□□□□ 0.34
SEC13-206ENST00000397102 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
SEC13-206ENST00000397102 TNPO1Q92973 898 aaKnown RBP17.19■□□□□ 0.34
SEC13-206ENST00000397102 RIPOR3Q96MK2 946 aa17.19■□□□□ 0.34
SEC13-206ENST00000397102 CELF4Q9BZC1 486 aaKnown RBP17.19■□□□□ 0.34
SEC13-206ENST00000397102 PCDHA2Q9Y5H9 948 aa17.19■□□□□ 0.34
SEC13-206ENST00000397102 H0Y858 1186 aa17.18■□□□□ 0.34
SEC13-206ENST00000397102 FGF18O76093 207 aa17.18■□□□□ 0.34
SEC13-206ENST00000397102 MTMR1Q13613 665 aa17.18■□□□□ 0.34
SEC13-206ENST00000397102 SPOUT1Q5T280 376 aaKnown RBP17.18■□□□□ 0.34
SEC13-206ENST00000397102 TMEM184AQ6ZMB5 413 aa17.18■□□□□ 0.34
SEC13-206ENST00000397102 SMC5Q8IY18 1101 aa17.18■□□□□ 0.34
SEC13-206ENST00000397102 RRP36Q96EU6 259 aaKnown RBP17.18■□□□□ 0.34
SEC13-206ENST00000397102 SPZ1Q9BXG8 430 aa17.18■□□□□ 0.34
SEC13-206ENST00000397102 S1PR5Q9H228 398 aa17.18■□□□□ 0.34
SEC13-206ENST00000397102 TMX1Q9H3N1 280 aa17.18■□□□□ 0.34
SEC13-206ENST00000397102 RNF216Q9NWF9 866 aaPredicted RBP17.18■□□□□ 0.34
SEC13-206ENST00000397102 PCDHB7Q9Y5E2 793 aa17.18■□□□□ 0.34
SEC13-206ENST00000397102 UBIAD1Q9Y5Z9 338 aa17.18■□□□□ 0.34
SEC13-206ENST00000397102 ZFHX2Q9C0A1 2572 aaPredicted RBP17.17■□□□□ 0.34
SEC13-206ENST00000397102 FSCN2O14926 492 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 MAFGO15525 162 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 GALR2O43603 387 aaPredicted RBP17.17■□□□□ 0.34
SEC13-206ENST00000397102 ERVFC1P60507 584 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 KCNC3Q14003 757 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 SART3Q15020 963 aaKnown RBP17.17■□□□□ 0.34
SEC13-206ENST00000397102 ANKRD54Q6NXT1 300 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 CATIPQ7Z7H3 387 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 ZBTB33Q86T24 672 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 NME8Q8N427 588 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 PCYT2Q99447 389 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 IL25Q9H293 177 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 AZI2Q9H6S1 392 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 PKD2L1Q9P0L9 805 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 TRPC6Q9Y210 931 aa17.17■□□□□ 0.34
SEC13-206ENST00000397102 SMIM35A0A1B0GVV1 85 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 TBKBP1A7MCY6 615 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 PDGFBP01127 241 aaPredicted RBP17.16■□□□□ 0.34
SEC13-206ENST00000397102 KRT76Q01546 638 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 NFX1Q12986 1120 aaKnown RBP17.16■□□□□ 0.34
SEC13-206ENST00000397102 B4GALNT3Q6L9W6 998 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 CHD1LQ86WJ1 897 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 THNSL1Q8IYQ7 743 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 COLGALT1Q8NBJ5 622 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 RASGRP4Q8TDF6 673 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 JPH1Q9HDC5 661 aaPredicted RBP17.16■□□□□ 0.34
SEC13-206ENST00000397102 C1orf112Q9NSG2 853 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 TMEM260Q9NX78 707 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 SEC63Q9UGP8 760 aaKnown RBP17.16■□□□□ 0.34
SEC13-206ENST00000397102 LZTS1Q9Y250 596 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 CFAP54Q96N23 3096 aa17.16■□□□□ 0.34
SEC13-206ENST00000397102 MGEA5O60502 916 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 CYP21A2P08686 494 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 IBSPP21815 317 aaPredicted RBP17.15■□□□□ 0.34
SEC13-206ENST00000397102 SMARCA1P28370 1054 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 TECP42680 631 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 PLCB4Q15147 1175 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 TMEM266Q2M3C6 531 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 SYCE2Q6PIF2 218 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 RALYLQ86SE5 291 aaKnown RBP17.15■□□□□ 0.34
SEC13-206ENST00000397102 TRAPPC12Q8WVT3 735 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 ERVK-5Q9HDB9 667 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 JADE2Q9NQC1 790 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 SLC9A2Q9UBY0 812 aa17.15■□□□□ 0.34
SEC13-206ENST00000397102 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
SEC13-206ENST00000397102 HOXB8P17481 243 aaPredicted RBP17.14■□□□□ 0.33
SEC13-206ENST00000397102 LAG3P18627 525 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 ODR4Q5SWX8 454 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 FAM102BQ5T8I3 360 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 PLPP4Q5VZY2 271 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 SLC24A5Q71RS6 500 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 ASCL5Q7RTU5 278 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 PLPPR4Q7Z2D5 763 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 UBALD2Q8IYN6 164 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 KREMEN2Q8NCW0 462 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 NCOA7Q8NI08 942 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 CTCFLQ8NI51 663 aaPredicted RBP17.14■□□□□ 0.33
SEC13-206ENST00000397102 ADAM2Q99965 735 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 PSTPIP2Q9H939 334 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 RGS18Q9NS28 235 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 TYW1Q9NV66 732 aaKnown RBP17.14■□□□□ 0.33
SEC13-206ENST00000397102 HCSTQ9UBK5 93 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms