RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 NME8Q8N427 588 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 RDM1Q8NG50 284 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 ATP8B4Q8TF62 1192 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 SLC5A5Q92911 643 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 AIFM3Q96NN9 605 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 GUCD1Q96NT3 240 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 ZNF576Q9H609 170 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 PCDHA2Q9Y5H9 948 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 MYH9P35579 1960 aaKnown RBP12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 COL1A2P08123 1366 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 CCDC194A0A1B0GVG4 234 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 WDR64B1ANS9 1081 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 KIF28PB7ZC32 967 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 TULP1O00294 542 aaPredicted RBP12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 BACH1O14867 736 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 MSH4O15457 936 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 PSAPP07602 524 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 MARK3P27448 753 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 KCNJ6P48051 423 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 JAK3P52333 1124 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 ZNF484Q5JVG2 852 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 SWSAP1Q6NVH7 229 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 ZNF710Q8N1W2 664 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 USP38Q8NB14 1042 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 NSUN7Q8NE18 718 aaKnown RBP12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 BBXQ8WY36 941 aaPredicted RBP12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 APBB2Q92870 758 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 FAM20AQ96MK3 541 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 KIF2CQ99661 725 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 SLC28A3Q9HAS3 691 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 UPF2Q9HAU5 1272 aaKnown RBP12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 BRMS1Q9HCU9 246 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 ZNF302Q9NR11 478 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 SH2B1Q9NRF2 756 aaPredicted RBP12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 KCNJ14Q9UNX9 436 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 TRPC6Q9Y210 931 aa12.55□□□□□ -0.4
NDUFA9-202ENST00000396655 SMIM35A0A1B0GVV1 85 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 GRXCR1A8MXD5 290 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 TBX3O15119 743 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 GAS7O60861 476 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 PSMD10O75832 226 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 WDR5P61964 334 aaKnown RBP12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 IER5Q5VY09 327 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 PDXDC2PQ6P474 469 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 B3GNT9Q6UX72 402 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 NEK8Q86SG6 692 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 HERC6Q8IVU3 1022 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 CCDC60Q8IWA6 550 aaPredicted RBP12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 SEPT8Q92599 483 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 FAM167AQ96KS9 214 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 FAM161BQ96MY7 647 aa12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 CDX2Q99626 313 aaPredicted RBP12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
NDUFA9-202ENST00000396655 DDX39AO00148 427 aaKnown RBP12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 LARGE1O95461 756 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 CHRNA1P02708 482 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 PBX2P40425 430 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 TRIM29Q14134 588 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 RABEP1Q15276 862 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 LRCH2Q5VUJ6 765 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 DBF4BQ8NFT6 615 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 ETNPPLQ8TBG4 499 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 TEKT3Q9BXF9 490 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 DISC1Q9NRI5 854 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 NRBP2Q9NSY0 501 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 DDX25Q9UHL0 483 aaKnown RBP12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 KDM3AQ9Y4C1 1321 aa12.53□□□□□ -0.4
NDUFA9-202ENST00000396655 MAGEB2O15479 319 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 GJB5O95377 273 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 MMP1P03956 469 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 ATP4AP20648 1035 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 KLRC1P26715 233 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 KRT2P35908 639 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 HMGN5P82970 282 aaKnown RBP12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 MGAT3Q09327 533 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 INF2Q27J81 1249 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 MTHFD1LQ6UB35 978 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 RUFY4Q6ZNE9 571 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 DNAJB3Q8WWF6 145 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 TNFRSF25Q93038 417 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 RAD9AQ99638 391 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 IFIH1Q9BYX4 1025 aaKnown RBP12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 KCNMB3Q9NPA1 279 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 SAMM50Q9Y512 469 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 IGSF9BQ9UPX0 1349 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 WDR81Q562E7 1941 aa12.52□□□□□ -0.41
NDUFA9-202ENST00000396655 ZBTB42B2RXF5 422 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 M0QZ92 97 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 TDP2O95551 362 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 AMHP03971 560 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 IGBP1P78318 339 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 MRPS6P82932 125 aaKnown RBP12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 PPP2R5CQ13362 524 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 GRIN2CQ14957 1233 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 LETM2Q2VYF4 491 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 FBXO47Q5MNV8 452 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 POTEHQ6S545 545 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 PIK3AP1Q6ZUJ8 805 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms