RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 KCTD17Q8N5Z5 321 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 BANK1Q8NDB2 785 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 TOX2Q96NM4 488 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 SCAND2PQ9GZW5 306 aaPredicted RBP18.41■□□□□ 0.54
AP1S3-202ENST00000396653 RNPEPQ9H4A4 650 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 RGL1Q9NZL6 768 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 HDAC6Q9UBN7 1215 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 RCOR1Q9UKL0 485 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 NRCAMQ92823 1304 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 KDM3AQ9Y4C1 1321 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 RRN3P2A6NIE6 340 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 SPATA31C1P0DKV0 1188 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 GNAT1P11488 350 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 RGS19P49795 217 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 ATN1P54259 1190 aaPredicted RBP18.4■□□□□ 0.54
AP1S3-202ENST00000396653 RTP1P59025 263 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 CYP4A11Q02928 519 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 PPFIA1Q13136 1202 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 LRRC26Q2I0M4 334 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 FAM126BQ8IXS8 530 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 CKAP2LQ8IYA6 745 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 SNX29Q8TEQ0 813 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 TRPC6Q9Y210 931 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 PPME1Q9Y570 386 aa18.4■□□□□ 0.54
AP1S3-202ENST00000396653 C17orf102A2RUQ5 167 aa18.39■□□□□ 0.53
AP1S3-202ENST00000396653 TLR3O15455 904 aaKnown RBP18.39■□□□□ 0.53
AP1S3-202ENST00000396653 MED24O75448 989 aa18.39■□□□□ 0.53
AP1S3-202ENST00000396653 STBD1O95210 358 aa18.39■□□□□ 0.53
AP1S3-202ENST00000396653 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.53
AP1S3-202ENST00000396653 CCT6AP40227 531 aaKnown RBP18.39■□□□□ 0.53
AP1S3-202ENST00000396653 GRIN1Q05586 938 aa18.39■□□□□ 0.53
AP1S3-202ENST00000396653 CTTNQ14247 550 aaKnown RBP18.39■□□□□ 0.53
AP1S3-202ENST00000396653 FAM47CQ5HY64 1035 aa18.39■□□□□ 0.53
AP1S3-202ENST00000396653 ZNF484Q5JVG2 852 aa18.39■□□□□ 0.53
AP1S3-202ENST00000396653 HYIQ5T013 277 aa18.39■□□□□ 0.53
AP1S3-202ENST00000396653 CATSPER3Q86XQ3 398 aa18.39■□□□□ 0.53
AP1S3-202ENST00000396653 ZNF579Q8NAF0 562 aaKnown RBP18.39■□□□□ 0.53
AP1S3-202ENST00000396653 LEO1Q8WVC0 666 aaPredicted RBP18.39■□□□□ 0.53
AP1S3-202ENST00000396653 SPATA32Q96LK8 384 aa18.39■□□□□ 0.53
AP1S3-202ENST00000396653 NRBP2Q9NSY0 501 aa18.39■□□□□ 0.53
AP1S3-202ENST00000396653 WRAP73Q9P2S5 460 aaPredicted RBP18.39■□□□□ 0.53
AP1S3-202ENST00000396653 PP2D1A8MPX8 630 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 CUTAO60888 179 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 CD4P01730 458 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 XRCC6P12956 609 aaKnown RBP eCLIP18.38■□□□□ 0.53
AP1S3-202ENST00000396653 INSRRP14616 1297 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 CHMP4BP1P59074 171 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 ADAM17P78536 824 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 GRIK4Q16099 956 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 TRIM60Q495X7 471 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 TPH2Q8IWU9 490 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 LMBR1Q8WVP7 490 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 MMTAG2Q9BU76 263 aaKnown RBP18.38■□□□□ 0.53
AP1S3-202ENST00000396653 NIFKQ9BYG3 293 aaKnown RBP18.38■□□□□ 0.53
AP1S3-202ENST00000396653 CCSER1Q9C0I3 900 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 NT5C3AQ9H0P0 336 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 CSRNP2Q9H175 543 aa18.38■□□□□ 0.53
AP1S3-202ENST00000396653 EVPLQ92817 2033 aa18.37■□□□□ 0.53
AP1S3-202ENST00000396653 DCDC2CA8MYV0 355 aa18.37■□□□□ 0.53
AP1S3-202ENST00000396653 YWHABP31946 246 aaKnown RBP18.37■□□□□ 0.53
AP1S3-202ENST00000396653 UBA7P41226 1012 aa18.37■□□□□ 0.53
AP1S3-202ENST00000396653 TARBP2Q15633 366 aaKnown RBP18.37■□□□□ 0.53
AP1S3-202ENST00000396653 GDF6Q6KF10 455 aaPredicted RBP18.37■□□□□ 0.53
AP1S3-202ENST00000396653 OTUD6AQ7L8S5 288 aa18.37■□□□□ 0.53
AP1S3-202ENST00000396653 CABP7Q86V35 215 aa18.37■□□□□ 0.53
AP1S3-202ENST00000396653 NACC1Q96RE7 527 aa18.37■□□□□ 0.53
AP1S3-202ENST00000396653 ANKEF1Q9NU02 776 aa18.37■□□□□ 0.53
AP1S3-202ENST00000396653 SETD4Q9NVD3 440 aa18.37■□□□□ 0.53
AP1S3-202ENST00000396653 SEPT9Q9UHD8 586 aaPredicted RBP18.37■□□□□ 0.53
AP1S3-202ENST00000396653 TANC1Q9C0D5 1861 aa18.37■□□□□ 0.53
AP1S3-202ENST00000396653 MBLAC1A4D2B0 266 aaPredicted RBP18.36■□□□□ 0.53
AP1S3-202ENST00000396653 ZBTB42B2RXF5 422 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 B4GALT4O60513 344 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 PQBP1O60828 265 aaKnown RBP18.36■□□□□ 0.53
AP1S3-202ENST00000396653 CDC25AP30304 524 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 TXLNAP40222 546 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 ME1P48163 572 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 TLE2Q04725 743 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 AXDND1Q5T1B0 1012 aaPredicted RBP18.36■□□□□ 0.53
AP1S3-202ENST00000396653 ANO5Q75V66 913 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 CALML4Q96GE6 196 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 CHAMP1Q96JM3 812 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 CLIC6Q96NY7 704 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 PCDHA7Q9UN72 937 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 ATP11BQ9Y2G3 1177 aa18.36■□□□□ 0.53
AP1S3-202ENST00000396653 DDX11L8A8MPP1 907 aa18.35■□□□□ 0.53
AP1S3-202ENST00000396653 RPLP2P05387 115 aaKnown RBP18.35■□□□□ 0.53
AP1S3-202ENST00000396653 HIC1Q14526 733 aa18.35■□□□□ 0.53
AP1S3-202ENST00000396653 ECM1Q16610 540 aa18.35■□□□□ 0.53
AP1S3-202ENST00000396653 PTGISQ16647 500 aa18.35■□□□□ 0.53
AP1S3-202ENST00000396653 TMEM119Q4V9L6 283 aa18.35■□□□□ 0.53
AP1S3-202ENST00000396653 POTEGQ6S5H5 508 aa18.35■□□□□ 0.53
AP1S3-202ENST00000396653 PPP1R13LQ8WUF5 828 aa18.35■□□□□ 0.53
AP1S3-202ENST00000396653 SYMPKQ92797 1274 aaKnown RBP18.35■□□□□ 0.53
AP1S3-202ENST00000396653 CDK5RAP3Q96JB5 506 aa18.35■□□□□ 0.53
AP1S3-202ENST00000396653 TRMT13Q9NUP7 481 aaKnown RBP18.35■□□□□ 0.53
AP1S3-202ENST00000396653 TUBE1Q9UJT0 475 aa18.35■□□□□ 0.53
AP1S3-202ENST00000396653 DBR1Q9UK59 544 aaKnown RBP18.35■□□□□ 0.53
AP1S3-202ENST00000396653 MAGEB2O15479 319 aa18.34■□□□□ 0.53
AP1S3-202ENST00000396653 CLTBP09497 229 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms