RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ZNF408Q9H9D4 720 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 GGA1Q9UJY5 639 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 SLC8A2Q9UPR5 921 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 EMBQ6PCB8 327 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 KRT26Q7Z3Y9 468 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 CNPY4Q8N129 248 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 FAM133AQ8N9E0 248 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 CYP4F11Q9HBI6 524 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 MED23Q9ULK4 1368 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 TMEM191CA6NGB0 347 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 NFKBIAP25963 317 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 ODR4Q5SWX8 454 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 SPATA5Q8NB90 893 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 FAM81BQ96LP2 452 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 LOC102724159A0A0B4J2E5 919 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 ACTN3Q08043 901 aaPredicted RBP11.04□□□□□ -0.64
COL4A4-201ENST00000396625 PWP2Q15269 919 aaKnown RBP11.04□□□□□ -0.64
COL4A4-201ENST00000396625 TRIM71Q2Q1W2 868 aaKnown RBP11.04□□□□□ -0.64
COL4A4-201ENST00000396625 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 RWDD4Q6NW29 188 aaKnown RBP11.04□□□□□ -0.64
COL4A4-201ENST00000396625 STAMBPL1Q96FJ0 436 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 APOL6Q9BWW8 343 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 SEPT9Q9UHD8 586 aaPredicted RBP11.04□□□□□ -0.64
COL4A4-201ENST00000396625 DCTN4Q9UJW0 460 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 ANXA13P27216 316 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 EPHB1P54762 984 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 BZW1Q7L1Q6 419 aaKnown RBP11.04□□□□□ -0.64
COL4A4-201ENST00000396625 SIX6OS1Q8N1H7 587 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 RETREG2Q8NC44 543 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 PARD6BQ9BYG5 372 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 AURKCQ9UQB9 309 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 SSH2Q76I76 1423 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 PIK3R2O00459 728 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 RNF14Q9UBS8 474 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 SYNGAP1Q96PV0 1343 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 ADCY9O60503 1353 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 KRT17Q04695 432 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 FAM160B1Q5W0V3 765 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 KDM4CQ9H3R0 1056 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 KLHL31Q9H511 634 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 NHEJ1Q9H9Q4 299 aaPredicted RBP11.04□□□□□ -0.64
COL4A4-201ENST00000396625 ZNF532Q9HCE3 1301 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 E7EWF7 191 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 COBLO75128 1261 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 GRK2P25098 689 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 ME3Q16798 604 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 FAM149B1Q96BN6 582 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 FAF2Q96CS3 445 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 OSBPL10Q9BXB5 764 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 RUBCNLQ9H714 662 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 KRT28Q7Z3Y7 464 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 TTC8Q8TAM2 541 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 PAGR1Q9BTK6 254 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 ZBTB40Q9NUA8 1239 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 C6orf203Q9P0P8 240 aaPredicted RBP11.04□□□□□ -0.64
COL4A4-201ENST00000396625 ADGRL1O94910 1474 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 GFPT2O94808 682 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 TFDP1Q14186 410 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 CHRNA2Q15822 529 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 CFAP73A6NFT4 308 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 KPNA7A9QM74 516 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 GANCQ8TET4 914 aa11.04□□□□□ -0.64
COL4A4-201ENST00000396625 GPKOWQ92917 476 aaPredicted RBP eCLIP11.04□□□□□ -0.64
COL4A4-201ENST00000396625 ZMYM3Q14202 1370 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 ABCA10Q8WWZ4 1543 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 HIBADHP31937 336 aaKnown RBP11.03□□□□□ -0.64
COL4A4-201ENST00000396625 FAM47EQ6ZV65 393 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 LSG1Q9H089 658 aaKnown RBP11.03□□□□□ -0.64
COL4A4-201ENST00000396625 ARHGEF3Q9NR81 526 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 ATP8A2Q9NTI2 1148 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 NSMCE4AQ9NXX6 385 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 TFCP2L1Q9NZI6 479 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 KRT38O76015 456 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 TOMM70O94826 608 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 TJP3O95049 919 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 RUNX1T1Q06455 604 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 ZNF654Q8IZM8 581 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 MTRQ99707 1265 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 AKT3Q9Y243 479 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 DLGAP3O95886 979 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 POLR2MP0CAP2 368 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 PAPOLAP51003 745 aaKnown RBP11.03□□□□□ -0.64
COL4A4-201ENST00000396625 ARL4CP56559 192 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 SLC30A9Q6PML9 568 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 SAYSD1Q9NPB0 183 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 SGSM2O43147 1006 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 METTL23Q86XA0 190 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 PLXNC1O60486 1568 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 GNPATO15228 680 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 BEGAINQ9BUH8 593 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 DNAJC17Q9NVM6 304 aaKnown RBP11.03□□□□□ -0.64
COL4A4-201ENST00000396625 FGGP02679 453 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 IGBP1P78318 339 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 ZFP42Q96MM3 310 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 GPBP1L1Q9HC44 474 aaPredicted RBP11.03□□□□□ -0.64
COL4A4-201ENST00000396625 PYCARDQ9ULZ3 195 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 PCDHA13Q9Y5I0 950 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 E5RI56 91 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 PSMA2P25787 234 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms