RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 C1orf53Q5VUE5 145 aa23.86■■□□□ 1.41
FXN-202ENST00000396364 LEO1Q8WVC0 666 aaPredicted RBP23.86■■□□□ 1.41
FXN-202ENST00000396364 HTATIP2Q9BUP3 242 aa23.86■■□□□ 1.41
FXN-202ENST00000396364 CCDC39Q9UFE4 941 aa23.86■■□□□ 1.41
FXN-202ENST00000396364 KAT6AQ92794 2004 aa23.86■■□□□ 1.41
FXN-202ENST00000396364 NRCAMQ92823 1304 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 RRN3P2A6NIE6 340 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 TLR3O15455 904 aaKnown RBP23.85■■□□□ 1.41
FXN-202ENST00000396364 SLITRK3O94933 977 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 PSMC6P62333 389 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 PRKCEQ02156 737 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 PLCB4Q15147 1175 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 SLC39A5Q6ZMH5 540 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 CABP7Q86V35 215 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 SESTD1Q86VW0 696 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 CSRNP2Q9H175 543 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 RGL1Q9NZL6 768 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 COL1A2P08123 1366 aa23.85■■□□□ 1.41
FXN-202ENST00000396364 GOLGA6L4A6NEF3 574 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 LYPLA2O95372 231 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 XRCC6P12956 609 aaKnown RBP eCLIP23.84■■□□□ 1.41
FXN-202ENST00000396364 PPFIA1Q13136 1202 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 CTTNQ14247 550 aaKnown RBP23.84■■□□□ 1.41
FXN-202ENST00000396364 ZNF484Q5JVG2 852 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 CATSPER3Q86XQ3 398 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 EXOC8Q8IYI6 725 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 NACC1Q96RE7 527 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 RNPEPQ9H4A4 650 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 SEPT9Q9UHD8 586 aaPredicted RBP23.84■■□□□ 1.41
FXN-202ENST00000396364 NOD1Q9Y239 953 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 PPME1Q9Y570 386 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 BRCA2P51587 3418 aa23.84■■□□□ 1.41
FXN-202ENST00000396364 LOXHD1Q8IVV2 1947 aa23.83■■□□□ 1.41
FXN-202ENST00000396364 C17orf102A2RUQ5 167 aa23.83■■□□□ 1.41
FXN-202ENST00000396364 SMIM10L2AP0DMW4 78 aa23.83■■□□□ 1.41
FXN-202ENST00000396364 SMIM10L2BP0DMW5 78 aa23.83■■□□□ 1.41
FXN-202ENST00000396364 UGCGQ16739 394 aa23.83■■□□□ 1.41
FXN-202ENST00000396364 UBE2Q1Q7Z7E8 422 aa23.83■■□□□ 1.41
FXN-202ENST00000396364 CCSER1Q9C0I3 900 aa23.83■■□□□ 1.41
FXN-202ENST00000396364 FAM13BQ9NYF5 915 aa23.83■■□□□ 1.41
FXN-202ENST00000396364 DDX11L8A8MPP1 907 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 DCDC2CA8MYV0 355 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 YWHABP31946 246 aaKnown RBP23.82■■□□□ 1.4
FXN-202ENST00000396364 ATN1P54259 1190 aaPredicted RBP23.82■■□□□ 1.4
FXN-202ENST00000396364 SNX17Q15036 470 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 ZRSR1Q15695 479 aaKnown RBP23.82■■□□□ 1.4
FXN-202ENST00000396364 ADALQ6DHV7 355 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 SLC43A3Q8NBI5 491 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 CLIC6Q96NY7 704 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 GBP4Q96PP9 640 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 PYM1Q9BRP8 204 aaKnown RBP23.82■■□□□ 1.4
FXN-202ENST00000396364 ANKEF1Q9NU02 776 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 HDAC6Q9UBN7 1215 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 GTF2IRD1Q9UHL9 959 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 PCDHA7Q9UN72 937 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 DNM3Q9UQ16 869 aa23.82■■□□□ 1.4
FXN-202ENST00000396364 PP2D1A8MPX8 630 aa23.81■■□□□ 1.4
FXN-202ENST00000396364 ZNF862O60290 1169 aa23.81■■□□□ 1.4
FXN-202ENST00000396364 MED24O75448 989 aa23.81■■□□□ 1.4
FXN-202ENST00000396364 RPLP2P05387 115 aaKnown RBP23.81■■□□□ 1.4
FXN-202ENST00000396364 SPATA31C1P0DKV0 1188 aa23.81■■□□□ 1.4
FXN-202ENST00000396364 GRIK4Q16099 956 aa23.81■■□□□ 1.4
FXN-202ENST00000396364 TRMT1LQ7Z2T5 733 aaKnown RBP23.81■■□□□ 1.4
FXN-202ENST00000396364 TOX2Q96NM4 488 aa23.81■■□□□ 1.4
FXN-202ENST00000396364 JPH2Q9BR39 696 aaPredicted RBP23.81■■□□□ 1.4
FXN-202ENST00000396364 NIFKQ9BYG3 293 aaKnown RBP23.81■■□□□ 1.4
FXN-202ENST00000396364 INSRRP14616 1297 aa23.8■■□□□ 1.4
FXN-202ENST00000396364 ATP4AP20648 1035 aa23.8■■□□□ 1.4
FXN-202ENST00000396364 CDC25AP30304 524 aa23.8■■□□□ 1.4
FXN-202ENST00000396364 GRIN1Q05586 938 aa23.8■■□□□ 1.4
FXN-202ENST00000396364 HYIQ5T013 277 aa23.8■■□□□ 1.4
FXN-202ENST00000396364 SYMPKQ92797 1274 aaKnown RBP23.8■■□□□ 1.4
FXN-202ENST00000396364 DDX19AQ9NUU7 478 aaKnown RBP23.8■■□□□ 1.4
FXN-202ENST00000396364 KIAA1024Q9UPX6 916 aa23.8■■□□□ 1.4
FXN-202ENST00000396364 MAGEB2O15479 319 aa23.79■■□□□ 1.4
FXN-202ENST00000396364 CDK7P50613 346 aa23.79■■□□□ 1.4
FXN-202ENST00000396364 POTEGQ6S5H5 508 aa23.79■■□□□ 1.4
FXN-202ENST00000396364 CCDC73Q6ZRK6 1079 aa23.79■■□□□ 1.4
FXN-202ENST00000396364 ANKRD33Q7Z3H0 272 aa23.79■■□□□ 1.4
FXN-202ENST00000396364 RETREG2Q8NC44 543 aa23.79■■□□□ 1.4
FXN-202ENST00000396364 SETD4Q9NVD3 440 aa23.79■■□□□ 1.4
FXN-202ENST00000396364 DBR1Q9UK59 544 aaKnown RBP23.79■■□□□ 1.4
FXN-202ENST00000396364 ATP11BQ9Y2G3 1177 aa23.79■■□□□ 1.4
FXN-202ENST00000396364 GRIN2DO15399 1336 aa23.79■■□□□ 1.4
FXN-202ENST00000396364 PQBP1O60828 265 aaKnown RBP23.78■■□□□ 1.4
FXN-202ENST00000396364 RTP1P59025 263 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 IGBP1P78318 339 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 TBC1D8BQ0IIM8 1120 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 PTGISQ16647 500 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 MTERF2Q49AM1 385 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 XKR9Q5GH70 373 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 SPECC1Q5M775 1068 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 AXDND1Q5T1B0 1012 aaPredicted RBP23.78■■□□□ 1.4
FXN-202ENST00000396364 CCDC155Q8N6L0 562 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 LMBR1Q8WVP7 490 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 EPSTI1Q96J88 318 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 CEP170P1Q96L14 293 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 MMTAG2Q9BU76 263 aaKnown RBP23.78■■□□□ 1.4
FXN-202ENST00000396364 GDPD2Q9HCC8 539 aa23.78■■□□□ 1.4
FXN-202ENST00000396364 TUBE1Q9UJT0 475 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms