RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 MAN2A1Q16706 1144 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 QRICH1Q2TAL8 776 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 SLC9C1Q4G0N8 1177 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 CEP85LQ5SZL2 805 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 CFAP58Q5T655 872 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 PAPD7Q5XG87 772 aaKnown RBP10.2□□□□□ -0.78
NDE1-201ENST00000396354 PODNQ7Z5L7 613 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 PIGOQ8TEQ8 1089 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 TTYH3Q9C0H2 523 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 MED4Q9NPJ6 270 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 STIM2Q9P246 746 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 DDX39AO00148 427 aaKnown RBP10.2□□□□□ -0.78
NDE1-201ENST00000396354 TULP2O00295 520 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 ZBTB39O15060 712 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 C21orf2O43822 256 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 NR2F2P24468 414 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 KCNB1Q14721 858 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 STRIP1Q5VSL9 837 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 CYP2W1Q8TAV3 490 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 ZIM3Q96PE6 472 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 NUP58Q9BVL2 599 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 TLR10Q9BXR5 811 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 RIC8AQ9NPQ8 531 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 FAM184BQ9ULE4 1060 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 CENPFP49454 3210 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 C10orf71Q711Q0 1435 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 TLDC2A0PJX2 215 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 EBAG9O00559 213 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 OPLAHO14841 1288 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 IRAK1P51617 712 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 NNTQ13423 1086 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 IQCEQ6IPM2 695 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 UBLCP1Q8WVY7 318 aaPredicted RBP10.19□□□□□ -0.78
NDE1-201ENST00000396354 TAF4BQ92750 862 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 CCDC113Q9H0I3 377 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 PSTPIP2Q9H939 334 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 SWAP70Q9UH65 585 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 ZBTB21Q9ULJ3 1066 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 PLAGL2Q9UPG8 496 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 ZBTB5O15062 677 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 LRRN2O75325 713 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 POLD1P28340 1107 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 ARHGAP44Q17R89 818 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 HAUS3Q68CZ6 603 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 WDR93Q6P2C0 686 aa10.19□□□□□ -0.78
NDE1-201ENST00000396354 CELF4Q9BZC1 486 aaKnown RBP10.19□□□□□ -0.78
NDE1-201ENST00000396354 SHTN1A0MZ66 631 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 LAD1O00515 517 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 TLR2O60603 784 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 ZNF76P36508 570 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 ECE1P42892 770 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 KCNMA1Q12791 1236 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 TATDN1Q6P1N9 297 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 RAD54LQ92698 747 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 C7orf25Q9BPX7 421 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 IDI2Q9BXS1 227 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 RAB34Q9BZG1 259 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 RGL1Q9NZL6 768 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 SIK3Q9Y2K2 1263 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 MYO3BQ8WXR4 1341 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 CLRN2A0PK11 232 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 PITPNM1O00562 1244 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 MEIS2O14770 477 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 DPEP1P16444 411 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 ZNF211Q13398 564 aaPredicted RBP10.18□□□□□ -0.78
NDE1-201ENST00000396354 MEA1Q16626 185 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 CERKLQ49MI3 558 aaPredicted RBP10.18□□□□□ -0.78
NDE1-201ENST00000396354 CFAP221Q4G0U5 840 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 TTMPQ5BVD1 217 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 MUM1L1Q5H9M0 696 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 CT47A1Q5JQC4 288 aaPredicted RBP10.18□□□□□ -0.78
NDE1-201ENST00000396354 CCDC84Q86UT8 332 aaPredicted RBP10.18□□□□□ -0.78
NDE1-201ENST00000396354 CCDC170Q8IYT3 715 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 PCDHA1Q9Y5I3 950 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 COL4A3BPQ9Y5P4 624 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 GCNT3O95395 438 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 HLA-DOAP06340 250 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 FECHP22830 423 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 CASP4P49662 377 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
NDE1-201ENST00000396354 CDC37Q16543 378 aaPredicted RBP10.18□□□□□ -0.78
NDE1-201ENST00000396354 KLHDC7AQ5VTJ3 777 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 SLFN13Q68D06 897 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 UNC13DQ70J99 1090 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 FAM169AQ9Y6X4 670 aa10.18□□□□□ -0.78
NDE1-201ENST00000396354 E7EVH7 732 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 GFPT2O94808 682 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 NDUFB10O96000 172 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 GH2P01242 217 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 PLA2G4BP0C869 781 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 ITGA4P13612 1032 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 TMOD1P28289 359 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 CYP2J2P51589 502 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 MNAT1P51948 309 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 DHX9Q08211 1270 aaKnown RBP10.17□□□□□ -0.78
NDE1-201ENST00000396354 CENPPQ6IPU0 288 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 STYK1Q6J9G0 422 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 PHLDB2Q86SQ0 1253 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 ACER1Q8TDN7 264 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 U2AF1L4Q8WU68 220 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms