RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 CAP2P40123 477 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 MRPL12P52815 198 aaKnown RBP11.31□□□□□ -0.6
HIF1A-203ENST00000394997 MRPS9P82933 396 aaKnown RBP11.31□□□□□ -0.6
HIF1A-203ENST00000394997 ZNF772Q68DY9 489 aaPredicted RBP11.31□□□□□ -0.6
HIF1A-203ENST00000394997 SLC35C1Q96A29 364 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
HIF1A-203ENST00000394997 VPS33BQ9H267 617 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 ADAMTS5Q9UNA0 930 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 PCDHGC5Q9Y5F6 944 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 COL4A3BPQ9Y5P4 624 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 SYF2O95926 243 aaKnown RBP11.31□□□□□ -0.6
HIF1A-203ENST00000394997 ACTN2P35609 894 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 SLC1A4P43007 532 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 FAM83AQ86UY5 434 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 COG1Q8WTW3 980 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 WNK4Q96J92 1243 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 AMNQ9BXJ7 453 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 LUC7L2Q9Y383 392 aaKnown RBP11.31□□□□□ -0.6
HIF1A-203ENST00000394997 ANO9A1A5B4 782 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 ENC1O14682 589 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 HLA-DOAP06340 250 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 BMP3P12645 472 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 HOXA13P31271 388 aaPredicted RBP11.31□□□□□ -0.6
HIF1A-203ENST00000394997 WHAMMP3Q1A5X7 153 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 ICE2Q659A1 982 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 FAM20AQ96MK3 541 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 UIMC1Q96RL1 719 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 NAPGQ99747 312 aaPredicted RBP11.31□□□□□ -0.6
HIF1A-203ENST00000394997 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 PLCB1Q9NQ66 1216 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 MYO6Q9UM54 1294 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 PDCD11Q14690 1871 aaKnown RBP11.31□□□□□ -0.6
HIF1A-203ENST00000394997 MYH9P35579 1960 aaKnown RBP11.31□□□□□ -0.6
HIF1A-203ENST00000394997 PLXNA1Q9UIW2 1896 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 H0YIN7 160 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 PRKCIP41743 596 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 CASP4P49662 377 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 USP14P54578 494 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 TBC1D8BQ0IIM8 1120 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 ITGB3BPQ13352 177 aaPredicted RBP11.3□□□□□ -0.6
HIF1A-203ENST00000394997 TUBB2AQ13885 445 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 SOGA3Q5TF21 947 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 PLEKHO2Q8TD55 490 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 CALML4Q96GE6 196 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 MYCBPQ99417 103 aaPredicted RBP11.3□□□□□ -0.6
HIF1A-203ENST00000394997 EIF2AK1Q9BQI3 630 aaKnown RBP11.3□□□□□ -0.6
HIF1A-203ENST00000394997 TUBB2BQ9BVA1 445 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 MLXIPQ9HAP2 919 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 TELO2Q9Y4R8 837 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 NFKBIEO00221 500 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 EBAG9O00559 213 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 C21orf2O43822 256 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 INPP5BP32019 993 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 AARSP49588 968 aaKnown RBP eCLIP11.3□□□□□ -0.6
HIF1A-203ENST00000394997 KIF11P52732 1056 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 KCTD17Q8N5Z5 321 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 BANK1Q8NDB2 785 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 PPM1EQ8WY54 764 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 KCNN1Q92952 543 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 NT5C3AQ9H0P0 336 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 CEP72Q9P209 647 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 ZBTB12Q9Y330 459 aaPredicted RBP11.3□□□□□ -0.6
HIF1A-203ENST00000394997 PCDHA13Q9Y5I0 950 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 ASTN2O75129 1339 aaPredicted RBP11.3□□□□□ -0.6
HIF1A-203ENST00000394997 WNT10BO00744 389 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 ZEB2O60315 1214 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 ARP10275 920 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 FAM26FQ5R3K3 315 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 SLFN11Q7Z7L1 901 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 SLFN12Q8IYM2 578 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 MYOCDQ8IZQ8 938 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 UNC45AQ9H3U1 944 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 RGL1Q9NZL6 768 aa11.3□□□□□ -0.6
HIF1A-203ENST00000394997 PON1P27169 355 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 AMPD3Q01432 767 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 GFPT1Q06210 699 aaPredicted RBP11.29□□□□□ -0.6
HIF1A-203ENST00000394997 AENQ8WTP8 325 aaKnown RBP11.29□□□□□ -0.6
HIF1A-203ENST00000394997 HDAC7Q8WUI4 952 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 CNKSR1Q969H4 720 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 IQCDQ96DY2 449 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 SNX12Q9UMY4 172 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 EYA4O95677 639 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 EIF4A3P38919 411 aaKnown RBP11.29□□□□□ -0.6
HIF1A-203ENST00000394997 FKBP3Q00688 224 aaKnown RBP11.29□□□□□ -0.6
HIF1A-203ENST00000394997 COG2Q14746 738 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 KIAA1328Q86T90 577 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 CEP57Q86XR8 500 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 CSRNP1Q96S65 589 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 CEP89Q96ST8 783 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 PACSIN1Q9BY11 444 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 GLT8D2Q9H1C3 349 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 VCPKMTQ9H867 229 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 ABCB6Q9NP58 842 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 N4BP1O75113 896 aaKnown RBP11.29□□□□□ -0.6
HIF1A-203ENST00000394997 SSBP05455 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
HIF1A-203ENST00000394997 BCRP11274 1271 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
HIF1A-203ENST00000394997 FAM83BQ5T0W9 1011 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 KRT79Q5XKE5 535 aa11.29□□□□□ -0.6
HIF1A-203ENST00000394997 FBXO11Q86XK2 927 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms