RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 WDR64B1ANS9 1081 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 B4DLN1 442 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 STX10O60499 249 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 FECHP22830 423 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 FXR1P51114 621 aaKnown RBP eCLIP16.55■□□□□ 0.246e-6■■■□□ 17.2
CCT4-201ENST00000394440 EDRF1Q3B7T1 1238 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 ZNF746Q6NUN9 644 aaPredicted RBP16.55■□□□□ 0.24
CCT4-201ENST00000394440 PPFIBP1Q86W92 1011 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 NELFCDQ8IXH7 590 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 BAG1Q99933 345 aaPredicted RBP16.55■□□□□ 0.24
CCT4-201ENST00000394440 TRAF3IP3Q9Y228 551 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 NFASCO94856 1347 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 ZNFX1Q9P2E3 1918 aaKnown RBP16.55■□□□□ 0.24
CCT4-201ENST00000394440 ARHGAP6O43182 974 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 CASP14P31944 242 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 MTIF2P46199 727 aaKnown RBP16.55■□□□□ 0.24
CCT4-201ENST00000394440 MAPK7Q13164 816 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 UGCGQ16739 394 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 FASTKD5Q7L8L6 764 aaKnown RBP16.55■□□□□ 0.24
CCT4-201ENST00000394440 C4orf19Q8IY42 314 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 CDHR1Q96JP9 859 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 CEP63Q96MT8 703 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 MOV10L1Q9BXT6 1211 aaKnown RBP16.55■□□□□ 0.24
CCT4-201ENST00000394440 SEL1LQ9UBV2 794 aa16.55■□□□□ 0.24
CCT4-201ENST00000394440 MYH9P35579 1960 aaKnown RBP16.54■□□□□ 0.24
CCT4-201ENST00000394440 MYBP10242 640 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 RARRES1P49788 294 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 MARSP56192 900 aaKnown RBP16.54■□□□□ 0.24
CCT4-201ENST00000394440 CNTN2Q02246 1040 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 CNGA4Q8IV77 575 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 ANKRD35Q8N283 1001 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 NOC4LQ9BVI4 516 aaKnown RBP16.54■□□□□ 0.24
CCT4-201ENST00000394440 SAMM50Q9Y512 469 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 ARHGEF35A5YM69 484 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 SPATA31C2B4DYI2 1134 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 FAM13AO94988 1023 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 ALDH5A1P51649 535 aaPredicted RBP16.54■□□□□ 0.24
CCT4-201ENST00000394440 MAN2A1Q16706 1144 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 KNOP1Q1ED39 458 aaKnown RBP16.54■□□□□ 0.24
CCT4-201ENST00000394440 MAP1SQ66K74 1059 aaPredicted RBP16.54■□□□□ 0.24
CCT4-201ENST00000394440 DAW1Q8N136 415 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 CCDC51Q96ER9 411 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 ERGIC2Q96RQ1 377 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 PARVGQ9HBI0 331 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 TXNRD2Q9NNW7 524 aa16.54■□□□□ 0.24
CCT4-201ENST00000394440 CEP350Q5VT06 3117 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 RNF225M0QZC1 329 aaPredicted RBP16.53■□□□□ 0.24
CCT4-201ENST00000394440 TRAF5O00463 557 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 EIF3DO15371 548 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCT4-201ENST00000394440 EDNRBP24530 442 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 ICAM3P32942 547 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 PSMC5P62195 406 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 GNPTABQ3T906 1256 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 NYAP1Q6ZVC0 841 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 PAGR1Q9BTK6 254 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 TTYH3Q9C0H2 523 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 MRPL44Q9H9J2 332 aaKnown RBP16.53■□□□□ 0.24
CCT4-201ENST00000394440 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 RBPJLQ9UBG7 517 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 TPM2P07951 284 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 PADI6Q6TGC4 694 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 SMAP1Q8IYB5 467 aaPredicted RBP16.53■□□□□ 0.24
CCT4-201ENST00000394440 FAM133AQ8N9E0 248 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 R3HDMLQ9H3Y0 253 aa16.53■□□□□ 0.24
CCT4-201ENST00000394440 SFI1A8K8P3 1242 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 PDXKO00764 312 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 PRPF6O94906 941 aaKnown RBP16.52■□□□□ 0.24
CCT4-201ENST00000394440 SLC25A27O95847 323 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 FSTL1Q12841 308 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 STXBP2Q15833 593 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 VWA3BQ502W6 1294 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 NCAPG2Q86XI2 1143 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 CPLX3Q8WVH0 158 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 TCEAL9Q9UHQ7 104 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 CLEC11AQ9Y240 323 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 PCDHA10Q9Y5I2 948 aa16.52■□□□□ 0.24
CCT4-201ENST00000394440 ZMYM2Q9UBW7 1377 aa16.52■□□□□ 0.23
CCT4-201ENST00000394440 SOWAHBA6NEL2 793 aa16.52■□□□□ 0.23
CCT4-201ENST00000394440 EIF3JO75822 258 aaKnown RBP16.52■□□□□ 0.23
CCT4-201ENST00000394440 ERCC3P19447 782 aa16.52■□□□□ 0.23
CCT4-201ENST00000394440 YWHABP31946 246 aaKnown RBP16.52■□□□□ 0.23
CCT4-201ENST00000394440 TBC1D8BQ0IIM8 1120 aa16.52■□□□□ 0.23
CCT4-201ENST00000394440 SNAPC2Q13487 334 aa16.52■□□□□ 0.23
CCT4-201ENST00000394440 MYCT1Q8N699 235 aa16.52■□□□□ 0.23
CCT4-201ENST00000394440 C16orf45Q96MC5 204 aaPredicted RBP16.52■□□□□ 0.23
CCT4-201ENST00000394440 NAA15Q9BXJ9 866 aaKnown RBP16.52■□□□□ 0.23
CCT4-201ENST00000394440 NDST4Q9H3R1 872 aa16.52■□□□□ 0.23
CCT4-201ENST00000394440 TYW1Q9NV66 732 aaKnown RBP16.52■□□□□ 0.23
CCT4-201ENST00000394440 UBE4BO95155 1302 aa16.52■□□□□ 0.23
CCT4-201ENST00000394440 RASSF10A6NK89 507 aa16.51■□□□□ 0.23
CCT4-201ENST00000394440 HIP1RO75146 1068 aa16.51■□□□□ 0.23
CCT4-201ENST00000394440 GCNT3O95395 438 aa16.51■□□□□ 0.23
CCT4-201ENST00000394440 TPM1P09493 284 aa16.51■□□□□ 0.23
CCT4-201ENST00000394440 OSBPP22059 807 aa16.51■□□□□ 0.23
CCT4-201ENST00000394440 COPB2P35606 906 aa16.51■□□□□ 0.23
CCT4-201ENST00000394440 DNTTIP2Q5QJE6 756 aaKnown RBP16.51■□□□□ 0.23
CCT4-201ENST00000394440 PPP1R13BQ96KQ4 1090 aa16.51■□□□□ 0.23
CCT4-201ENST00000394440 STRA6Q9BX79 667 aa16.51■□□□□ 0.23
CCT4-201ENST00000394440 ABHD10Q9NUJ1 306 aa16.51■□□□□ 0.23
CCT4-201ENST00000394440 TRMT1Q9NXH9 659 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms