RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 UPP2O95045 317 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 ASNSP08243 561 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 RFX5P48382 616 aaPredicted RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 SLC12A1Q13621 1099 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 SP8Q8IXZ3 490 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 KCTD6Q8NC69 237 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 PRMT6Q96LA8 375 aaPredicted RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 TACO1Q9BSH4 297 aaKnown RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 NSRP1Q9H0G5 558 aaKnown RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 TMEM60Q9H2L4 133 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 SNX25Q9H3E2 840 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 NKIRAS1Q9NYS0 192 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 HACL1Q9UJ83 578 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 TTC7AQ9ULT0 858 aaPredicted RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 G3BP2Q9UN86 482 aaKnown RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 CDHR2Q9BYE9 1310 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 DLG5Q8TDM6 1919 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 SOX10P56693 466 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 ZKSCAN8Q15776 578 aaPredicted RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 AMHR2Q16671 573 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 PADI6Q6TGC4 694 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 LDHDQ86WU2 507 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 CCDC117Q8IWD4 279 aaPredicted RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 GPR161Q8N6U8 529 aaKnown RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 RETREG2Q8NC44 543 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 ARHGEF2Q92974 986 aaKnown RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 NDST4Q9H3R1 872 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 SIGLEC1Q9BZZ2 1709 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 LRRC53A6NM62 1247 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 KIF11P52732 1056 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 DLC1Q96QB1 1528 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 POLRMTO00411 1230 aaKnown RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 PPP1R2P41236 205 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 PRELPP51888 382 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 RWDD4Q6NW29 188 aaKnown RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 SMC1BQ8NDV3 1235 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 TDRD7Q8NHU6 1098 aaKnown RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 OSBPL5Q9H0X9 879 aaPredicted RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 A0A1W2PQ27 194 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 A0A1W2PQ64 194 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 A0A1W2PQD8 194 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 IPO5O00410 1097 aaKnown RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 P4HA1P13674 534 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 ANKRD40Q6AI12 368 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 SYCE1Q8N0S2 351 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 LRRC71Q8N4P6 559 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 GSDMAQ96QA5 445 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 PI4K2AQ9BTU6 479 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 MFAP3P55082 362 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 PTK2Q05397 1052 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 HHATQ5VTY9 493 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 TRIM58Q8NG06 486 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 ATP6V0A1Q93050 837 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 POLR3FQ9H1D9 316 aaPredicted RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 LRFN2Q9ULH4 789 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 HIP1RO75146 1068 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 EXOSC10Q01780 885 aaKnown RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 GRIK5Q16478 980 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 EPC2Q52LR7 807 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 ACER1Q8TDN7 264 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 MICAL1Q8TDZ2 1067 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 RPF1Q9H9Y2 349 aaKnown RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 SLC5A4Q9NY91 659 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 ZNF70Q9UC06 446 aaPredicted RBP9.88□□□□□ -0.83
CDH11-202ENST00000394156 PCSK1NQ9UHG2 260 aa9.88□□□□□ -0.83
CDH11-202ENST00000394156 KDM6AO15550 1401 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 EBAG9O00559 213 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 NAA25Q14CX7 972 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 MAN2A1Q16706 1144 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 RABL6Q3YEC7 729 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 INTS8Q75QN2 995 aaKnown RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 METTL16Q86W50 562 aaKnown RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 SPATA17Q96L03 361 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 GOLPH3Q9H4A6 298 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 KRT1P04264 644 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 SNX16P57768 344 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 NME3Q13232 169 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 TMEM270Q6UE05 265 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 ESYT3A0FGR9 886 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 ZNF500O60304 480 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 GNGT1P63211 74 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 HDLBPQ00341 1268 aaKnown RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 BAATQ14032 418 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 C2CD6Q53TS8 623 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 PPP6R3Q5H9R7 873 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 GKAP1Q5VSY0 366 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 SLC38A10Q9HBR0 1119 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 MYOZ2Q9NPC6 264 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 ZNF302Q9NR11 478 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 JCADQ9P266 1359 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 PGK2P07205 417 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 ZSCAN20P17040 1043 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 BASP1P80723 227 aaKnown RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 MAP7D1Q3KQU3 841 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 ZNF568Q3ZCX4 644 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 NFRKBQ6P4R8 1299 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 C2orf69Q8N8R5 385 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 DCAF4Q8WV16 495 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 CCDC78A2IDD5 438 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 NDUFA10O95299 355 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms