RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 PCDHA1Q9Y5I3 950 aa6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 ZFYVE9O95405 1425 aa6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 A0A087WWV3 80 aa6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 LMNAP02545 664 aaKnown RBP6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 GAP43P17677 238 aa6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 NR1D1P20393 614 aa6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 AARSP49588 968 aaKnown RBP eCLIP6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 EFTUD2Q15029 972 aaKnown RBP eCLIP6.1□□□□□ -1.431e-6■■■■□ 20
GAPVD1-206ENST00000394104 ACTR5Q9H9F9 607 aaPredicted RBP6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 HPS4Q9NQG7 708 aa6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 DDX28Q9NUL7 540 aaKnown RBP6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 ZFP69BQ9UJL9 534 aa6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 DBNLQ9UJU6 430 aaKnown RBP6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 ZNF229Q9UJW7 825 aa6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 PLAAQ9Y263 795 aa6.1□□□□□ -1.43
GAPVD1-206ENST00000394104 SEC24DO94855 1032 aaPredicted RBP6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 TMCC1O94876 653 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 RANBP1P43487 201 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 KCTD2Q14681 263 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 NDUFAF2Q8N183 169 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 RABGGTAQ92696 567 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 P2RX5Q93086 422 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 COPEO14579 308 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 NBNO60934 754 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 SERPING1P05155 500 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 AARS2Q5JTZ9 985 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 NUGGCQ68CJ6 796 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 GALNT17Q6IS24 598 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 PASD1Q8IV76 773 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 SLC17A8Q8NDX2 589 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 RFWD2Q8NHY2 731 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 FMO2Q99518 471 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 E5RI56 91 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 PFKFB2O60825 505 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 DCTN3O75935 186 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 ETF1P62495 437 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 MDM2Q00987 491 aaPredicted RBP6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 POU5F1BQ06416 359 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 DMTNQ08495 405 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 TJAP1Q5JTD0 557 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 BEND6Q5SZJ8 279 aaPredicted RBP6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 C6orf118Q5T5N4 469 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 ZNF658Q5TYW1 1059 aaPredicted RBP6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 PATL1Q86TB9 770 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 LRRC37BQ96QE4 947 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 NACC1Q96RE7 527 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 ZNF212Q9UDV6 495 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 CLCA2Q9UQC9 943 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 APOBEC2Q9Y235 224 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 GDF11O95390 407 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 CA4P22748 312 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 CIITAP33076 1130 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 EIF4A3P38919 411 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 PAPOLAP51003 745 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 DEUP1Q05D60 604 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 FSCBQ5H9T9 825 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 OR6B3Q8NGW1 331 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 SLC7A3Q8WY07 619 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 PITPNM3Q9BZ71 974 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 LZTS1Q9Y250 596 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 ZNF711Q9Y462 761 aa6.09□□□□□ -1.43
GAPVD1-206ENST00000394104 SUPT3HO75486 399 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 ARIH2O95376 493 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 KRT8P05787 483 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 KRT4P19013 534 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 GYS2P54840 703 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 COPS2P61201 443 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 KIAA1755Q5JYT7 1200 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 LRRC8EQ6NSJ5 796 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 EPM2AIP1Q7L775 607 aaPredicted RBP6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 NLRP4Q96MN2 994 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 VPS11Q9H270 941 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 ECT2Q9H8V3 914 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 TRIM45Q9H8W5 580 aaPredicted RBP6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 MID2Q9UJV3 735 aa6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 ZBTB12Q9Y330 459 aaPredicted RBP6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 ZNF608Q9ULD9 1512 aaPredicted RBP6.09□□□□□ -1.44
GAPVD1-206ENST00000394104 NEURL1BA8MQ27 555 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ATP5JP18859 108 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 SSTR3P32745 418 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 SF3B3Q15393 1217 aaKnown RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 UBE2SQ16763 222 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 MDH1BQ5I0G3 518 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 GJC2Q5T442 439 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 DNAJC10Q8IXB1 793 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ELMOD1Q8N336 334 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 TMCO5AQ8N6Q1 288 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 PBXIP1Q96AQ6 731 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 FAM167BQ9BTA0 163 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 KLHL8Q9P2G9 620 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 HPCAL4Q9UM19 191 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 NFU1Q9UMS0 254 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 RPRD2Q5VT52 1461 aaKnown RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 WDR17Q8IZU2 1322 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 H0YC42 278 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 NEMP1O14524 444 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 DIAPH2O60879 1101 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 SPARCL1Q14515 664 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 PPP6R3Q5H9R7 873 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 TEX2Q8IWB9 1127 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms