RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 PRIMPOLQ96LW4 560 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 ERGIC2Q96RQ1 377 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 PFASO15067 1338 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 ZNF131P52739 623 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 RETREG2Q8NC44 543 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 DNERQ8NFT8 737 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 IWS1Q96ST2 819 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 NUP58Q9BVL2 599 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 NDST4Q9H3R1 872 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 AGTPBP1Q9UPW5 1226 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 TRAF3IP3Q9Y228 551 aa24.53■■□□□ 1.52
HMGA2-203ENST00000393578 ZNF746Q6NUN9 644 aaPredicted RBP24.52■■□□□ 1.52
HMGA2-203ENST00000393578 ANKRD35Q8N283 1001 aa24.52■■□□□ 1.52
HMGA2-203ENST00000393578 MYCT1Q8N699 235 aa24.52■■□□□ 1.52
HMGA2-203ENST00000393578 SENP7Q9BQF6 1050 aa24.52■■□□□ 1.52
HMGA2-203ENST00000393578 ABHD10Q9NUJ1 306 aa24.52■■□□□ 1.52
HMGA2-203ENST00000393578 NKRFO15226 690 aaKnown RBP eCLIP24.51■■□□□ 1.514e-8■□□□□ 8.1
HMGA2-203ENST00000393578 ZSCAN12O43309 604 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 CCNE2O96020 404 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 MYBP10242 640 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 OPTNQ96CV9 577 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 SPATC1LQ9H0A9 340 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 ASCC2Q9H1I8 757 aaPredicted RBP24.51■■□□□ 1.51
HMGA2-203ENST00000393578 KIF2AO00139 706 aaPredicted RBP24.51■■□□□ 1.51
HMGA2-203ENST00000393578 PDXKO00764 312 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 EIF3DO15371 548 aaKnown RBP eCLIP24.51■■□□□ 1.51
HMGA2-203ENST00000393578 RGS20O76081 388 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 GCNT3O95395 438 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 HOXD13P35453 343 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 MARSP56192 900 aaKnown RBP24.51■■□□□ 1.51
HMGA2-203ENST00000393578 SYCP1Q15431 976 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 C4orf19Q8IY42 314 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 CAPN11Q9UMQ6 739 aa24.51■■□□□ 1.51
HMGA2-203ENST00000393578 TTC26A0AVF1 554 aa24.5■■□□□ 1.51
HMGA2-203ENST00000393578 SFI1A8K8P3 1242 aa24.5■■□□□ 1.51
HMGA2-203ENST00000393578 RNF225M0QZC1 329 aaPredicted RBP24.5■■□□□ 1.51
HMGA2-203ENST00000393578 KRT9P35527 623 aa24.5■■□□□ 1.51
HMGA2-203ENST00000393578 PSMC5P62195 406 aa24.5■■□□□ 1.51
HMGA2-203ENST00000393578 HERVK_113P62684 666 aa24.5■■□□□ 1.51
HMGA2-203ENST00000393578 GNPTABQ3T906 1256 aa24.5■■□□□ 1.51
HMGA2-203ENST00000393578 PADI6Q6TGC4 694 aa24.5■■□□□ 1.51
HMGA2-203ENST00000393578 FASTKD5Q7L8L6 764 aaKnown RBP24.5■■□□□ 1.51
HMGA2-203ENST00000393578 POLD4Q9HCU8 107 aa24.5■■□□□ 1.51
HMGA2-203ENST00000393578 LUC7L2Q9Y383 392 aaKnown RBP24.5■■□□□ 1.51
HMGA2-203ENST00000393578 PRPF6O94906 941 aaKnown RBP24.49■■□□□ 1.51
HMGA2-203ENST00000393578 KCNA2P16389 499 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 ADAM9Q13443 819 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 LDLRAD1Q5T700 205 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 IQCDQ96DY2 449 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 MOV10L1Q9BXT6 1211 aaKnown RBP24.49■■□□□ 1.51
HMGA2-203ENST00000393578 NFASCO94856 1347 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 CETN3O15182 167 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 CALUO43852 315 aaPredicted RBP24.49■■□□□ 1.51
HMGA2-203ENST00000393578 YWHABP31946 246 aaKnown RBP24.49■■□□□ 1.51
HMGA2-203ENST00000393578 RARRES1P49788 294 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 CCDC40Q4G0X9 1142 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 FIGNQ5HY92 759 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 TMTC1Q8IUR5 882 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 BCAS3Q9H6U6 928 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 TYW1Q9NV66 732 aaKnown RBP24.49■■□□□ 1.51
HMGA2-203ENST00000393578 PPP2R2CQ9Y2T4 447 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 PCDHA10Q9Y5I2 948 aa24.49■■□□□ 1.51
HMGA2-203ENST00000393578 LCTP09848 1927 aa24.48■■□□□ 1.51
HMGA2-203ENST00000393578 SPATA31C2B4DYI2 1134 aa24.48■■□□□ 1.51
HMGA2-203ENST00000393578 TRIM21P19474 475 aaKnown RBP24.48■■□□□ 1.51
HMGA2-203ENST00000393578 MOGSQ13724 837 aa24.48■■□□□ 1.51
HMGA2-203ENST00000393578 STXBP2Q15833 593 aa24.48■■□□□ 1.51
HMGA2-203ENST00000393578 SMAP1Q8IYB5 467 aaPredicted RBP24.48■■□□□ 1.51
HMGA2-203ENST00000393578 OR8K1Q8NGG5 319 aa24.48■■□□□ 1.51
HMGA2-203ENST00000393578 TTYH3Q9C0H2 523 aa24.48■■□□□ 1.51
HMGA2-203ENST00000393578 UBE4BO95155 1302 aa24.48■■□□□ 1.51
HMGA2-203ENST00000393578 SOWAHDA6NJG2 315 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 PEX10O60683 326 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 TUBB4AP04350 444 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 NR2F2P24468 414 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 TOGARAM2Q6ZUX3 1019 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 STXBP4Q6ZWJ1 553 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 FAM178BQ8IXR5 827 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 FIZ1Q96SL8 496 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 DNAJC7Q99615 494 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 KIAA1217Q5T5P2 1943 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 HIP1RO75146 1068 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 EIF3JO75822 258 aaKnown RBP24.47■■□□□ 1.51
HMGA2-203ENST00000393578 CNTN2Q02246 1040 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 UGCGQ16739 394 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 ODR4Q5SWX8 454 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 ZNF720Q7Z2F6 126 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 REXO1L1PQ8IX06 675 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 PAXBP1Q9Y5B6 917 aa24.47■■□□□ 1.51
HMGA2-203ENST00000393578 GOLGA6L9A6NEM1 432 aa24.46■■□□□ 1.51
HMGA2-203ENST00000393578 UNCXA6NJT0 531 aa24.46■■□□□ 1.51
HMGA2-203ENST00000393578 RASSF10A6NK89 507 aa24.46■■□□□ 1.51
HMGA2-203ENST00000393578 NMT1P30419 496 aaKnown RBP24.46■■□□□ 1.51
HMGA2-203ENST00000393578 MAPK7Q13164 816 aa24.46■■□□□ 1.51
HMGA2-203ENST00000393578 CYP26C1Q6V0L0 522 aa24.46■■□□□ 1.51
HMGA2-203ENST00000393578 NCAPG2Q86XI2 1143 aa24.46■■□□□ 1.51
HMGA2-203ENST00000393578 TRIM59Q8IWR1 403 aa24.46■■□□□ 1.51
HMGA2-203ENST00000393578 PCMTD1Q96MG8 357 aaPredicted RBP24.46■■□□□ 1.51
HMGA2-203ENST00000393578 PAGR1Q9BTK6 254 aa24.46■■□□□ 1.51
HMGA2-203ENST00000393578 ANKEF1Q9NU02 776 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms