RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 EML1O00423 815 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 ZNF862O60290 1169 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 PSAPP07602 524 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 RSPH10BP0C881 870 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 CD44P16070 742 aaKnown RBP8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 RABGGTBP53611 331 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 HMGN5P82970 282 aaKnown RBP8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 RBL2Q08999 1139 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 NBR1Q14596 966 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 RASIP1Q5U651 963 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 FAM160B1Q5W0V3 765 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 MOXD1Q6UVY6 613 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 PLPPR4Q7Z2D5 763 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 MIER3Q7Z3K6 550 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 CKAP2LQ8IYA6 745 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 SMAP1Q8IYB5 467 aaPredicted RBP8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 RPUSD2Q8IZ73 545 aaKnown RBP8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 BANK1Q8NDB2 785 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 ATP8B4Q8TF62 1192 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 DNAJB3Q8WWF6 145 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 HERVK_113Q902F9 699 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 HAS1Q92839 578 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 PPP1R16BQ96T49 567 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 RIT2Q99578 217 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 SH2D3AQ9BRG2 576 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 KCNMB3Q9NPA1 279 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 VAV3Q9UKW4 847 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 PCDHA10Q9Y5I2 948 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 SCN5AQ14524 2016 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 MBLAC1A4D2B0 266 aaPredicted RBP8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 CHRNA1P02708 482 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 GNAT1P11488 350 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 MYOGP15173 224 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 GJB2P29033 226 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 RFC2P35250 354 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 DEFB103AP81534 67 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 PRKCEQ02156 737 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 SAFBQ15424 915 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 NCAPH2Q6IBW4 605 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 PPP4R3AQ6IN85 833 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 MTHFD1LQ6UB35 978 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 B3GNT9Q6UX72 402 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 DEFB123Q8N688 67 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 FBXO18Q8NFZ0 1043 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 PBX4Q9BYU1 374 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 MAFBQ9Y5Q3 323 aaPredicted RBP8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 SLC4A7Q9Y6M7 1214 aa8.65□□□□□ -1.02
HMGB3P1-201ENST00000393368 MARCH6O60337 910 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 HBP1O60381 514 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 NEMFO60524 1076 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 SLC34A2O95436 690 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 C22orf31O95567 290 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 CXCL10P02778 98 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 OATP04181 439 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 PFKMP08237 780 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 GHRP10912 638 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 GCFC2P16383 781 aaKnown RBP8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 DNAJB2P25686 324 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 KLRC1P26715 233 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 MCM7P33993 719 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 SLC26A2P50443 739 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 JAK3P52333 1124 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 SMAD3P84022 425 aaKnown RBP8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 MGAT3Q09327 533 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 GNL2Q13823 731 aaKnown RBP8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 ZNF174Q15697 407 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 CNKSR3Q6P9H4 555 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 DBF4BQ8NFT6 615 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 ZNF668Q96K58 619 aaPredicted RBP8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 TMEM60Q9H2L4 133 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 TTYH1Q9H313 450 aaPredicted RBP8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 WRAP73Q9P2S5 460 aaPredicted RBP8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 SEPT9Q9UHD8 586 aaPredicted RBP8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 YBX2Q9Y2T7 364 aaKnown RBP8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 CDY2AQ9Y6F7 541 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 CHD9Q3L8U1 2897 aa8.64□□□□□ -1.03
HMGB3P1-201ENST00000393368 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 RRN3P2A6NIE6 340 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 ARHGEF15O94989 841 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 STBD1O95210 358 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 ACTN1P12814 892 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 ATP2A2P16615 1042 aaKnown RBP8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 SFNP31947 248 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 TXKP42681 527 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 CLCN3P51790 818 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 WDR5P61964 334 aaKnown RBP8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 MRPS6P82932 125 aaKnown RBP8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 CYP4A11Q02928 519 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 SPIRE1Q08AE8 756 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 PPP2R5CQ13362 524 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 LPIN1Q14693 890 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 CALCRLQ16602 461 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 MTERF2Q49AM1 385 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 ZNF484Q5JVG2 852 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 PLA2G4FQ68DD2 849 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 MCTP1Q6DN14 999 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 FAM117BQ6P1L5 589 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 TAF2Q6P1X5 1199 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms