RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 XAB2Q9HCS7 855 aaKnown RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 MLXIPLQ9NP71 852 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 TCP11L1Q9NUJ3 509 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 ADAM22Q9P0K1 906 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 TUBE1Q9UJT0 475 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 NIP7Q9Y221 180 aaKnown RBP eCLIP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 USP31Q70CQ4 1352 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 TRIM64CA6NLI5 447 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 TRPA1O75762 1119 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 HSD17B3P37058 310 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 DNM2P50570 870 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 HAND2P61296 217 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 MAP3K21Q5TCX8 1036 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 RASSF3Q86WH2 238 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 KIAA2013Q8IYS2 634 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 SCG3Q8WXD2 468 aaKnown RBP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 NOC4LQ9BVI4 516 aaKnown RBP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 NDE1Q9NXR1 346 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 CYP39A1Q9NYL5 469 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 TFR2Q9UP52 801 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 CD163L1Q9NR16 1453 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 OVOS2A0A0J9YW53 1432 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 TECPR2O15040 1411 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 OVOS2Q6IE36 1432 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 TMEM247A6NEH6 219 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 NEURL1BA8MQ27 555 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 RASGRF2O14827 1237 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 MARK3P27448 753 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 NOP14P78316 857 aaKnown RBP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 SSRP1Q08945 709 aaKnown RBP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 KRT31Q15323 416 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 SLC9C1Q4G0N8 1177 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 C6orf183Q5T699 404 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 DAB2IPQ5VWQ8 1189 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 FAM186BQ8IYM0 893 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 SMYD4Q8IYR2 804 aaPredicted RBP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 GRAMD1CQ8IYS0 662 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 ERMNQ8TAM6 284 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 STAMQ92783 540 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 SH2D4AQ9H788 454 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 METTL5Q9NRN9 209 aaKnown RBP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 CLIC5Q9NZA1 410 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 TMOD2Q9NZR1 351 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 CROTQ9UKG9 612 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 ITIH6Q6UXX5 1313 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 NCK2O43639 380 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 GYPCP04921 128 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 ITGA2BP08514 1039 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 RGS2P41220 211 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 IL9RQ01113 521 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 PPIDQ08752 370 aaKnown RBP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 TMEM62Q0P6H9 643 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 MCMDC2Q4G0Z9 681 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 RIBC1Q8N443 379 aaPredicted RBP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 ENAHQ8N8S7 591 aaPredicted RBP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.22□□□□□ -1.095e-8■■■■■ 65.3
VTI1A-201ENST00000393077 ERP27Q96DN0 273 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 SLC26A6Q9BXS9 759 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 ZMYND12Q9H0C1 365 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 CCDC68Q9H2F9 335 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 CUEDC2Q9H467 287 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 MLXIPQ9HAP2 919 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 ARHGAP42A6NI28 874 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 VAV1P15498 845 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 DRD4P21917 467 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 FMR1Q06787 632 aaKnown RBP eCLIP8.22□□□□□ -1.09
VTI1A-201ENST00000393077 ARHGEF18Q6ZSZ5 1173 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 OTUD6AQ7L8S5 288 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 TRIML2Q8N7C3 387 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 SSH3Q8TE77 659 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 EPSTI1Q96J88 318 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 AZI2Q9H6S1 392 aa8.22□□□□□ -1.09
VTI1A-201ENST00000393077 WDR17Q8IZU2 1322 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 SFI1A8K8P3 1242 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 F8VZ95 297 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 IRS4O14654 1257 aaPredicted RBP8.21□□□□□ -1.09
VTI1A-201ENST00000393077 PPP6R2O75170 966 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 GMNNO75496 209 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 FTCDO95954 541 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 HOXD12P35452 270 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 NCALDP61601 193 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 ERVK-24P63145 666 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 RNASELQ05823 741 aaKnown RBP8.21□□□□□ -1.09
VTI1A-201ENST00000393077 RBM46Q8TBY0 533 aaKnown RBP8.21□□□□□ -1.09
VTI1A-201ENST00000393077 EDC3Q96F86 508 aaKnown RBP8.21□□□□□ -1.09
VTI1A-201ENST00000393077 DBNDD2Q9BQY9 259 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 PYM1Q9BRP8 204 aaKnown RBP8.21□□□□□ -1.09
VTI1A-201ENST00000393077 SEPT11Q9NVA2 429 aaKnown RBP8.21□□□□□ -1.09
VTI1A-201ENST00000393077 TUBGCP4Q9UGJ1 667 aa8.21□□□□□ -1.09
VTI1A-201ENST00000393077 TTC26A0AVF1 554 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 GOLGA8AA7E2F4 631 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 TJP3O95049 919 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 FAM153BP0C7A2 387 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 IL15P40933 162 aaPredicted RBP8.21□□□□□ -1.1
VTI1A-201ENST00000393077 BASP1P80723 227 aaKnown RBP8.21□□□□□ -1.1
VTI1A-201ENST00000393077 AMPD2Q01433 879 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 PDE4BQ07343 736 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 CNPY1Q3B7I2 92 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 GRAMD1BQ3KR37 738 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms