RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 GOLGA8JA6NMD2 632 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 PFDN1O60925 122 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 STMN1P16949 149 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 NBPF9Q3BBW0 867 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 ICE2Q659A1 982 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 LY9Q9HBG7 655 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 SLC38A10Q9HBR0 1119 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 BSDC1Q9NW68 430 aaPredicted RBP14.12□□□□□ -0.15
LCA5-202ENST00000392959 IQANK1A0A1B0GTG1 560 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 SFI1A8K8P3 1242 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 CDC27P30260 824 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 USP14P54578 494 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 SUSD4Q5VX71 490 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 APOL6Q9BWW8 343 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 GINM1Q9NU53 330 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 PALM3A6NDB9 673 aaPredicted RBP14.11□□□□□ -0.15
LCA5-202ENST00000392959 PRPSAP2O60256 369 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 ZRANB2O95218 330 aaKnown RBP eCLIP14.11□□□□□ -0.15
LCA5-202ENST00000392959 SERPINB2P05120 415 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 GFPT1Q06210 699 aaPredicted RBP14.11□□□□□ -0.15
LCA5-202ENST00000392959 KCNH2Q12809 1159 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 OR6B2Q6IFH4 312 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 SHC4Q6S5L8 630 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 MRFAP1Q9Y605 127 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 SCINQ9Y6U3 715 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 ESYT3A0FGR9 886 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 ZNF233A6NK53 670 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 DCTN3O75935 186 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 HOXA13P31271 388 aaPredicted RBP14.11□□□□□ -0.15
LCA5-202ENST00000392959 MTERF2Q49AM1 385 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 MIS18BP1Q6P0N0 1132 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 NFRKBQ6P4R8 1299 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 GADL1Q6ZQY3 521 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 C7orf31Q8N865 590 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 ENAHQ8N8S7 591 aaPredicted RBP14.11□□□□□ -0.15
LCA5-202ENST00000392959 ANGPTL2Q9UKU9 493 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 PLS3P13797 630 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 MAGOHP61326 146 aaKnown RBP14.11□□□□□ -0.15
LCA5-202ENST00000392959 AP3B2Q13367 1082 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 KCTD2Q14681 263 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 TSGA10IPQ3SY00 556 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 RSRC2Q7L4I2 434 aaKnown RBP14.11□□□□□ -0.15
LCA5-202ENST00000392959 LRRC43Q8N309 656 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 MAML1Q92585 1016 aa14.11□□□□□ -0.15
LCA5-202ENST00000392959 TRIM56Q9BRZ2 755 aaKnown RBP14.11□□□□□ -0.15
LCA5-202ENST00000392959 ANKARQ7Z5J8 1434 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 UBN2Q6ZU65 1347 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 ZBED1O96006 694 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 RAB44Q7Z6P3 723 aaPredicted RBP14.1□□□□□ -0.15
LCA5-202ENST00000392959 PIGBQ92521 554 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 TMEM47Q9BQJ4 181 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 DBNDD1Q9H9R9 158 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 CACYBPQ9HB71 228 aaKnown RBP14.1□□□□□ -0.15
LCA5-202ENST00000392959 CNOT8Q9UFF9 292 aaKnown RBP14.1□□□□□ -0.15
LCA5-202ENST00000392959 ANAPC7Q9UJX3 599 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 GMNCA6NCL1 334 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 KRT37O76014 449 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 NR3C1P04150 777 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 POLE2P56282 527 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 ATG16L1Q676U5 607 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 FAM47EQ6ZV65 393 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.1□□□□□ -0.15
LCA5-202ENST00000392959 SYT2Q8N9I0 419 aaPredicted RBP14.1□□□□□ -0.15
LCA5-202ENST00000392959 SAYSD1Q9NPB0 183 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 HDAC6Q9UBN7 1215 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 MID2Q9UJV3 735 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 NLRP1Q9C000 1473 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 TMEM94Q12767 1356 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 GOLGA8CPA6NN73 597 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 SNAP23O00161 211 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 TADA3O75528 432 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 KPNA2P52292 529 aaKnown RBP14.1□□□□□ -0.15
LCA5-202ENST00000392959 ALX1Q15699 326 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 FAM196AQ6ZSG2 479 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 SFR1Q86XK3 245 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 COG1Q8WTW3 980 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 DDX47Q9H0S4 455 aaKnown RBP14.1□□□□□ -0.15
LCA5-202ENST00000392959 FGFR1OP2Q9NVK5 253 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 RASA4BC9J798 803 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 K7ERI5 159 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 RASA4O43374 803 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 CYP2D6P10635 497 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 TBC1D9BQ66K14 1250 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 EXOC8Q8IYI6 725 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 PIGOQ8TEQ8 1089 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 WDR24Q96S15 920 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 RPS6KC1Q96S38 1066 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 TRIM55Q9BYV6 548 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 ADAM22Q9P0K1 906 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 ADD3Q9UEY8 706 aaKnown RBP14.1□□□□□ -0.15
LCA5-202ENST00000392959 AKT3Q9Y243 479 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 CEP170Q5SW79 1584 aa14.1□□□□□ -0.15
LCA5-202ENST00000392959 PPFIA2O75334 1257 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 TRPA1O75762 1119 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 PEX3P56589 373 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 GPC5P78333 572 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 TXNRD1Q16881 649 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 BBS5Q8N3I7 341 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 DRC3Q9H069 523 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 G3BP2Q9UN86 482 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms