RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 TRAPPC12Q8WVT3 735 aa23.33■■□□□ 1.33
CDCA4-202ENST00000392590 TMEM60Q9H2L4 133 aa23.33■■□□□ 1.33
CDCA4-202ENST00000392590 TTC12Q9H892 705 aaPredicted RBP23.33■■□□□ 1.33
CDCA4-202ENST00000392590 RFC2P35250 354 aa23.33■■□□□ 1.32
CDCA4-202ENST00000392590 ZNF484Q5JVG2 852 aa23.33■■□□□ 1.32
CDCA4-202ENST00000392590 C9orf50Q5SZB4 431 aa23.33■■□□□ 1.32
CDCA4-202ENST00000392590 ZNF618Q5T7W0 954 aa23.33■■□□□ 1.32
CDCA4-202ENST00000392590 NCAPH2Q6IBW4 605 aa23.33■■□□□ 1.32
CDCA4-202ENST00000392590 FAM167AQ96KS9 214 aa23.33■■□□□ 1.32
CDCA4-202ENST00000392590 NRBP2Q9NSY0 501 aa23.33■■□□□ 1.32
CDCA4-202ENST00000392590 ZNF862O60290 1169 aa23.32■■□□□ 1.32
CDCA4-202ENST00000392590 TOB1P50616 345 aaPredicted RBP23.32■■□□□ 1.32
CDCA4-202ENST00000392590 UGCGQ16739 394 aa23.32■■□□□ 1.32
CDCA4-202ENST00000392590 RUFY4Q6ZNE9 571 aa23.32■■□□□ 1.32
CDCA4-202ENST00000392590 DEFB128Q7Z7B8 93 aa23.32■■□□□ 1.32
CDCA4-202ENST00000392590 PARNO95453 639 aaKnown RBP23.31■■□□□ 1.32
CDCA4-202ENST00000392590 OATP04181 439 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 PSMC5P62195 406 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 PRKCEQ02156 737 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 SPIRE1Q08AE8 756 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 NBR1Q14596 966 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 EPHA7Q15375 998 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 RILPL1Q5EBL4 403 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 TMEM240Q5SV17 173 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 PSRC1Q6PGN9 363 aaPredicted RBP23.31■■□□□ 1.32
CDCA4-202ENST00000392590 MTHFD1LQ6UB35 978 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 ZNF365Q70YC5 407 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 BANK1Q8NDB2 785 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 ZBTB10Q96DT7 871 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.31■■□□□ 1.326e-6■■■■□ 21.1
CDCA4-202ENST00000392590 CEP131Q9UPN4 1083 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 PCDHA2Q9Y5H9 948 aa23.31■■□□□ 1.32
CDCA4-202ENST00000392590 COL1A2P08123 1366 aa23.3■■□□□ 1.32
CDCA4-202ENST00000392590 VPS37CA5D8V6 355 aaPredicted RBP23.3■■□□□ 1.32
CDCA4-202ENST00000392590 RSPH10B2B2RC85 870 aa23.3■■□□□ 1.32
CDCA4-202ENST00000392590 CAND2O75155 1236 aa23.3■■□□□ 1.32
CDCA4-202ENST00000392590 FGBP02675 491 aa23.3■■□□□ 1.32
CDCA4-202ENST00000392590 HSP90AA1P07900 732 aaKnown RBP23.3■■□□□ 1.32
CDCA4-202ENST00000392590 PFKMP08237 780 aa23.3■■□□□ 1.32
CDCA4-202ENST00000392590 OR52Z1P0C646 297 aa23.3■■□□□ 1.32
CDCA4-202ENST00000392590 RSPH10BP0C881 870 aa23.3■■□□□ 1.32
CDCA4-202ENST00000392590 KLRC1P26715 233 aa23.3■■□□□ 1.32
CDCA4-202ENST00000392590 RSPH3Q86UC2 560 aa23.3■■□□□ 1.32
CDCA4-202ENST00000392590 PCDHB6Q9Y5E3 794 aa23.3■■□□□ 1.32
CDCA4-202ENST00000392590 P4HBP07237 508 aaKnown RBP23.29■■□□□ 1.32
CDCA4-202ENST00000392590 SYT1P21579 422 aa23.29■■□□□ 1.32
CDCA4-202ENST00000392590 QARSP47897 775 aaKnown RBP23.29■■□□□ 1.32
CDCA4-202ENST00000392590 TRAF7Q6Q0C0 670 aa23.29■■□□□ 1.32
CDCA4-202ENST00000392590 RPAINQ86UA6 219 aa23.29■■□□□ 1.32
CDCA4-202ENST00000392590 DNAJB3Q8WWF6 145 aa23.29■■□□□ 1.32
CDCA4-202ENST00000392590 FTOQ9C0B1 505 aaKnown RBP eCLIP23.29■■□□□ 1.324e-8■□□□□ 8.5
CDCA4-202ENST00000392590 ZBTB42B2RXF5 422 aa23.28■■□□□ 1.32
CDCA4-202ENST00000392590 DKC1O60832 514 aaKnown RBP eCLIP23.28■■□□□ 1.32
CDCA4-202ENST00000392590 XKR3Q5GH77 459 aa23.28■■□□□ 1.32
CDCA4-202ENST00000392590 VWCEQ96DN2 955 aa23.28■■□□□ 1.32
CDCA4-202ENST00000392590 RNPC3Q96LT9 517 aaKnown RBP23.28■■□□□ 1.32
CDCA4-202ENST00000392590 FAM49AQ9H0Q0 323 aaPredicted RBP23.28■■□□□ 1.32
CDCA4-202ENST00000392590 CTSHP09668 335 aa23.28■■□□□ 1.32
CDCA4-202ENST00000392590 GPNMBQ14956 572 aa23.28■■□□□ 1.32
CDCA4-202ENST00000392590 C4orf32Q8N8J7 132 aa23.28■■□□□ 1.32
CDCA4-202ENST00000392590 RGL1Q9NZL6 768 aa23.28■■□□□ 1.32
CDCA4-202ENST00000392590 SMIM35A0A1B0GVV1 85 aa23.27■■□□□ 1.32
CDCA4-202ENST00000392590 DDX11L8A8MPP1 907 aa23.27■■□□□ 1.32
CDCA4-202ENST00000392590 NBNO60934 754 aa23.27■■□□□ 1.32
CDCA4-202ENST00000392590 RPLP2P05387 115 aaKnown RBP23.27■■□□□ 1.32
CDCA4-202ENST00000392590 TECP42680 631 aa23.27■■□□□ 1.32
CDCA4-202ENST00000392590 PTGDRQ13258 359 aa23.27■■□□□ 1.32
CDCA4-202ENST00000392590 LRIT3Q3SXY7 679 aa23.27■■□□□ 1.32
CDCA4-202ENST00000392590 OTOP2Q7RTS6 562 aa23.27■■□□□ 1.32
CDCA4-202ENST00000392590 BRAPQ7Z569 592 aa23.27■■□□□ 1.32
CDCA4-202ENST00000392590 DYDC2Q96IM9 177 aa23.27■■□□□ 1.32
CDCA4-202ENST00000392590 NIFKQ9BYG3 293 aaKnown RBP23.27■■□□□ 1.32
CDCA4-202ENST00000392590 SEPT9Q9UHD8 586 aaPredicted RBP23.27■■□□□ 1.32
CDCA4-202ENST00000392590 STBD1O95210 358 aa23.26■■□□□ 1.31
CDCA4-202ENST00000392590 FAM26DQ5JW98 314 aa23.26■■□□□ 1.31
CDCA4-202ENST00000392590 FERMT3Q86UX7 667 aa23.26■■□□□ 1.31
CDCA4-202ENST00000392590 HERVK_113Q902F9 699 aa23.26■■□□□ 1.31
CDCA4-202ENST00000392590 EIF2AK1Q9BQI3 630 aaKnown RBP23.26■■□□□ 1.31
CDCA4-202ENST00000392590 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.26■■□□□ 1.31
CDCA4-202ENST00000392590 MAGEB2O15479 319 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 SLITRK3O94933 977 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 C22orf31O95567 290 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 CXCL10P02778 98 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 ACTN1P12814 892 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 CYP4A11Q02928 519 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 CTTNQ14247 550 aaKnown RBP23.25■■□□□ 1.31
CDCA4-202ENST00000392590 MBTPS1Q14703 1052 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 TMEM266Q2M3C6 531 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 TPH2Q8IWU9 490 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 NME8Q8N427 588 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 HSD17B14Q9BPX1 270 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 LXNQ9BS40 222 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 MTIF3Q9H2K0 278 aaKnown RBP23.25■■□□□ 1.31
CDCA4-202ENST00000392590 ZSWIM4Q9H7M6 989 aa23.25■■□□□ 1.31
CDCA4-202ENST00000392590 RANBP2P49792 3224 aaKnown RBP23.24■■□□□ 1.31
CDCA4-202ENST00000392590 POTEMA6NI47 508 aa23.24■■□□□ 1.31
CDCA4-202ENST00000392590 CHRNA1P02708 482 aa23.24■■□□□ 1.31
CDCA4-202ENST00000392590 TARBP2Q15633 366 aaKnown RBP23.24■■□□□ 1.31
CDCA4-202ENST00000392590 IER5Q5VY09 327 aa23.24■■□□□ 1.31
CDCA4-202ENST00000392590 C4orf19Q8IY42 314 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms