RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 TSPY2A6NKD2 308 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 MPHOSPH10O00566 681 aaKnown RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 RGS20O76081 388 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 GDF11O95390 407 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 TSPY3P0CV98 308 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 TSPY8P0CW00 308 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 SNRPBP14678 240 aaKnown RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 AKR1B1P15121 316 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 IREB2P48200 963 aaKnown RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 ZNF75DP51815 510 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 KRT85P78386 507 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 TFAP4Q01664 338 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 TUBB2AQ13885 445 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 PRKG1Q13976 671 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 SART3Q15020 963 aaKnown RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 ZNF423Q2M1K9 1284 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 ABCB5Q2M3G0 1257 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 FAM47AQ5JRC9 791 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 BNC2Q6ZN30 1099 aaPredicted RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 AGMOQ6ZNB7 445 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 ARMC9Q7Z3E5 817 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 NOP9Q86U38 636 aaKnown RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 JAZF1Q86VZ6 243 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 MB21D2Q8IYB1 491 aaPredicted RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 CCDC150Q8NCX0 1101 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 ZNF830Q96NB3 372 aaPredicted RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 WRNIP1Q96S55 665 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 UBAC1Q9BSL1 405 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 TUBB2BQ9BVA1 445 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 UBXN6Q9BZV1 441 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 OSBPL2Q9H1P3 480 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 ALDH8A1Q9H2A2 487 aaPredicted RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 IGFLR1Q9H665 355 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 CABP5Q9NP86 173 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 DNAJB12Q9NXW2 375 aaKnown RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 ATXN7L1Q9ULK2 861 aaPredicted RBP8.44□□□□□ -1.06
TRBV28-201ENST00000390400 PYCARDQ9ULZ3 195 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 LIMCH1Q9UPQ0 1083 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 CYP46A1Q9Y6A2 500 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 PHLPP2Q6ZVD8 1323 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 WDR19Q8NEZ3 1342 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 PLIN4Q96Q06 1357 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 ATAD5Q96QE3 1844 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 DOCK1Q14185 1865 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 OTOFQ9HC10 1997 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 PRC1O43663 620 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 CTNND1O60716 968 aaKnown RBP8.43□□□□□ -1.06
TRBV28-201ENST00000390400 TOMM70O94826 608 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 CELF2O95319 508 aaKnown RBP8.43□□□□□ -1.06
TRBV28-201ENST00000390400 GH2P01242 217 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 BMP6P22004 513 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 RPS6KB1P23443 525 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 CASQ1P31415 396 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 CAP2P40123 477 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 TNNT3P45378 269 aaPredicted RBP8.43□□□□□ -1.06
TRBV28-201ENST00000390400 FKBP1BP68106 108 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 LMNB2Q03252 620 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 TPD52L1Q16890 204 aaPredicted RBP8.43□□□□□ -1.06
TRBV28-201ENST00000390400 CCDC178Q5BJE1 867 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 TMEM179Q6ZVK1 233 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 IQCA1Q86XH1 822 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.43□□□□□ -1.06
TRBV28-201ENST00000390400 NEDD1Q8NHV4 660 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 DDX11Q96FC9 970 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 UPF3BQ9BZI7 483 aaKnown RBP8.43□□□□□ -1.06
TRBV28-201ENST00000390400 PICK1Q9NRD5 415 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 ZSWIM5Q9P217 1185 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 GMPR2Q9P2T1 348 aaKnown RBP8.43□□□□□ -1.06
TRBV28-201ENST00000390400 ZNF112Q9UJU3 913 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 NAGPAQ9UK23 515 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 ANGEL1Q9UNK9 670 aaKnown RBP8.43□□□□□ -1.06
TRBV28-201ENST00000390400 CSADQ9Y600 493 aa8.43□□□□□ -1.06
TRBV28-201ENST00000390400 GREB1LQ9C091 1923 aaPredicted RBP8.42□□□□□ -1.06
TRBV28-201ENST00000390400 TLDC2A0PJX2 215 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 ERICH2A1L162 156 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 IFIT3O14879 490 aaKnown RBP8.42□□□□□ -1.06
TRBV28-201ENST00000390400 KLF4O43474 513 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 KIF1CO43896 1103 aaKnown RBP8.42□□□□□ -1.06
TRBV28-201ENST00000390400 USP2O75604 605 aaPredicted RBP8.42□□□□□ -1.06
TRBV28-201ENST00000390400 ZRANB2O95218 330 aaKnown RBP eCLIP8.42□□□□□ -1.06
TRBV28-201ENST00000390400 ASNSP08243 561 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 CPA1P15085 419 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 ANTXR2P58335 489 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 FSTL1Q12841 308 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 PWP1Q13610 501 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 RRP1BQ14684 758 aaKnown RBP8.42□□□□□ -1.06
TRBV28-201ENST00000390400 ANKRD1Q15327 319 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 TMEM67Q5HYA8 995 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 NOL9Q5SY16 702 aaKnown RBP8.42□□□□□ -1.06
TRBV28-201ENST00000390400 PCNX4Q63HM2 1172 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 ZNF746Q6NUN9 644 aaPredicted RBP8.42□□□□□ -1.06
TRBV28-201ENST00000390400 TMCO3Q6UWJ1 677 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 RUFY3Q7L099 469 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 CYB5R4Q7L1T6 521 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 CHST3Q7LGC8 479 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 VN1R5Q7Z5H4 357 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 SYT9Q86SS6 491 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 SCYL3Q8IZE3 742 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 C2orf69Q8N8R5 385 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 MNS1Q8NEH6 495 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms