RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 POTEGQ6S5H5 508 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 POTEEQ6S8J3 1075 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 CNTNAP4Q9C0A0 1308 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 PVALEFA0A1B0GWK0 134 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 ARHGAP4P98171 946 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 C12orf60Q5U649 245 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 SPATA24Q86W54 205 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 BBS5Q8N3I7 341 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 ACRBPQ8NEB7 543 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 SLC16A10Q8TF71 515 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 UNC13DQ70J99 1090 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 VPS52Q8N1B4 723 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 SNX25Q9H3E2 840 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 RPAP3Q9H6T3 665 aaPredicted RBP14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 MST1RQ04912 1400 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 ATP8B3O60423 1300 aa14.07□□□□□ -0.16
PTPRN2-203ENST00000389418 TRIM49BA6NDI0 452 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 RFX1P22670 979 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 PSMC4P43686 418 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 EXOSC10Q01780 885 aaKnown RBP14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 CUL4BQ13620 913 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 CYFIP1Q7L576 1253 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 PROM2Q8N271 834 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 ZNF609O15014 1411 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 FLT1P17948 1338 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 SOWAHDA6NJG2 315 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 A6NJR5 290 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 I3L4J1 428 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 CYP27A1Q02318 531 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 NFIAQ12857 509 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 C3orf67Q6ZVT6 689 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 MYL3P08590 195 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 APBA1Q02410 837 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 PALM2Q8IXS6 379 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 SRBD1Q8N5C6 995 aaKnown RBP14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 LRFN2Q9ULH4 789 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 MAGED2Q9UNF1 606 aaPredicted RBP14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 OATP04181 439 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 BFSP1Q12934 665 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 KRT31Q15323 416 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 SBK1Q52WX2 424 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 HOMER3Q9NSC5 361 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 SEL1LQ9UBV2 794 aa14.06□□□□□ -0.16
PTPRN2-203ENST00000389418 CEMIPQ8WUJ3 1361 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 PPFIA4O75335 1185 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 ADCY8P40145 1251 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 MESDQ14696 234 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 NCAPGQ9BPX3 1015 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 VPS37BQ9H9H4 285 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 BARHL2Q9NY43 387 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 PASKQ96RG2 1323 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 UBE2Q2LH0YL09 131 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 FOXN1O15353 648 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 ENTPD3O75355 529 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 TBC1D8O95759 1140 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 USP11P51784 963 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 PRELPP51888 382 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 ARMCX2Q7L311 632 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 C10orf67Q8IYJ2 551 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 KAZALD1Q96I82 304 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 OSBPL5Q9H0X9 879 aaPredicted RBP14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 DPH5Q9H2P9 285 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 FBXO28Q9NVF7 368 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 RSRC2Q7L4I2 434 aaKnown RBP14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 FASTKD5Q7L8L6 764 aaKnown RBP14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 HPS3Q969F9 1004 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 TYW5A2RUC4 315 aaKnown RBP14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 NDUFB10O96000 172 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 RBM46Q8TBY0 533 aaKnown RBP14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 KRT12Q99456 494 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 NDST4Q9H3R1 872 aa14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 EPB41L4AQ9HCS5 686 aaPredicted RBP14.05□□□□□ -0.16
PTPRN2-203ENST00000389418 GOLGA8CPA6NN73 597 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 GFPT2O94808 682 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 SWSAP1Q6NVH7 229 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 CLEC17AQ6ZS10 378 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 POLLQ9UGP5 575 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 FNDC3AQ9Y2H6 1198 aaKnown RBP14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 KIF28PB7ZC32 967 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 HHIPL2Q6UWX4 724 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 LDHDQ86WU2 507 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 FAM133AQ8N9E0 248 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 RPF1Q9H9Y2 349 aaKnown RBP14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 RGL1Q9NZL6 768 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 PRKAG2Q9UGJ0 569 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 CXCR5P32302 372 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 RFX5P48382 616 aaPredicted RBP14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 TNFAIP2Q03169 654 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 KCNV1Q6PIU1 500 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 CATSPER4Q7RTX7 472 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 ARHGAP24Q8N264 748 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 ZKSCAN4Q969J2 545 aaPredicted RBP14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 DEFB129Q9H1M3 183 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 ATP6V0A4Q9HBG4 840 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 SPTLC3Q9NUV7 552 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 SLC12A6Q9UHW9 1150 aa14.04□□□□□ -0.16
PTPRN2-203ENST00000389418 MEGF6O75095 1541 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 RGS16O15492 202 aaPredicted RBP14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 CIB2O75838 187 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 KIAA1841Q6NSI8 718 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms