RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 DNM2P50570 870 aa20.52■□□□□ 0.88
CSPG5-202ENST00000383738 MTMR1Q13613 665 aa20.52■□□□□ 0.88
CSPG5-202ENST00000383738 GKAP1Q5VSY0 366 aaPredicted RBP20.52■□□□□ 0.88
CSPG5-202ENST00000383738 CD248Q9HCU0 757 aa20.52■□□□□ 0.88
CSPG5-202ENST00000383738 EMILIN3Q9NT22 766 aa20.52■□□□□ 0.88
CSPG5-202ENST00000383738 SUGT1Q9Y2Z0 365 aa20.52■□□□□ 0.88
CSPG5-202ENST00000383738 GCFC2P16383 781 aaKnown RBP20.52■□□□□ 0.88
CSPG5-202ENST00000383738 P2RX5Q93086 422 aa20.52■□□□□ 0.88
CSPG5-202ENST00000383738 MTFR1LQ9H019 292 aa20.52■□□□□ 0.88
CSPG5-202ENST00000383738 PRCPP42785 496 aa20.52■□□□□ 0.87
CSPG5-202ENST00000383738 IRAK1P51617 712 aa20.52■□□□□ 0.87
CSPG5-202ENST00000383738 DYDC2Q96IM9 177 aa20.52■□□□□ 0.87
CSPG5-202ENST00000383738 BPIFA3Q9BQP9 254 aa20.52■□□□□ 0.87
CSPG5-202ENST00000383738 L1RE1Q9UN81 338 aa20.52■□□□□ 0.87
CSPG5-202ENST00000383738 TM4SF1P30408 202 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 PEX3P56589 373 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 BAATQ14032 418 aaPredicted RBP20.51■□□□□ 0.87
CSPG5-202ENST00000383738 ZKSCAN8Q15776 578 aaPredicted RBP20.51■□□□□ 0.87
CSPG5-202ENST00000383738 EARS2Q5JPH6 523 aaKnown RBP20.51■□□□□ 0.87
CSPG5-202ENST00000383738 TBC1D1Q86TI0 1168 aaPredicted RBP20.51■□□□□ 0.87
CSPG5-202ENST00000383738 CCDC50Q8IVM0 306 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 GGT7Q9UJ14 662 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 FBXO2Q9UK22 296 aaPredicted RBP20.51■□□□□ 0.87
CSPG5-202ENST00000383738 CSPG5O95196 566 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 ASIC2Q16515 512 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 SLC16A10Q8TF71 515 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 AP1M1Q9BXS5 423 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 NOVA2Q9UNW9 492 aaKnown RBP20.51■□□□□ 0.87
CSPG5-202ENST00000383738 EIF4A3P38919 411 aaKnown RBP20.51■□□□□ 0.87
CSPG5-202ENST00000383738 SESTD1Q86VW0 696 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 AK8Q96MA6 479 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 CPSF2Q9P2I0 782 aaKnown RBP20.51■□□□□ 0.87
CSPG5-202ENST00000383738 MAD2L2Q9UI95 211 aa20.51■□□□□ 0.87
CSPG5-202ENST00000383738 CORO7P57737 925 aa20.5■□□□□ 0.87
CSPG5-202ENST00000383738 SESN3P58005 492 aa20.5■□□□□ 0.87
CSPG5-202ENST00000383738 SEC23AQ15436 765 aa20.5■□□□□ 0.87
CSPG5-202ENST00000383738 VPS41P49754 854 aa20.5■□□□□ 0.87
CSPG5-202ENST00000383738 IPO5O00410 1097 aaKnown RBP20.5■□□□□ 0.87
CSPG5-202ENST00000383738 TCP1P17987 556 aaKnown RBP20.5■□□□□ 0.87
CSPG5-202ENST00000383738 HNRNPH1P31943 449 aaKnown RBP20.5■□□□□ 0.87
CSPG5-202ENST00000383738 BRDTQ58F21 947 aaPredicted RBP20.5■□□□□ 0.87
CSPG5-202ENST00000383738 RUFY4Q6ZNE9 571 aa20.5■□□□□ 0.87
CSPG5-202ENST00000383738 USTQ9Y2C2 406 aa20.5■□□□□ 0.87
CSPG5-202ENST00000383738 SPDYE2BA6NHP3 402 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 STXBP3O00186 592 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 SPDYE6P0CI01 402 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 EPHB4P54760 987 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 APOBEC3HQ6NTF7 200 aaKnown RBP20.49■□□□□ 0.87
CSPG5-202ENST00000383738 PHLDB2Q86SQ0 1253 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 ATG4CQ96DT6 458 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 NBPF3Q9H094 633 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 NSRP1Q9H0G5 558 aaKnown RBP20.49■□□□□ 0.87
CSPG5-202ENST00000383738 ATP8A1Q9Y2Q0 1164 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 DUSP10Q9Y6W6 482 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 LAD1O00515 517 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 ZNF658Q5TYW1 1059 aaPredicted RBP20.49■□□□□ 0.87
CSPG5-202ENST00000383738 SLC7A3Q8WY07 619 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 LRRC45Q96CN5 670 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 THOC1Q96FV9 657 aaKnown RBP20.49■□□□□ 0.87
CSPG5-202ENST00000383738 FAM49AQ9H0Q0 323 aaPredicted RBP20.49■□□□□ 0.87
CSPG5-202ENST00000383738 SUFUQ9UMX1 484 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 RIC1Q4ADV7 1423 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 LTN1O94822 1766 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 CTNND1O60716 968 aaKnown RBP20.49■□□□□ 0.87
CSPG5-202ENST00000383738 ARL6IP4Q66PJ3 421 aaKnown RBP20.49■□□□□ 0.87
CSPG5-202ENST00000383738 NLRP4Q96MN2 994 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 LBHD1Q9BQE6 289 aaPredicted RBP20.49■□□□□ 0.87
CSPG5-202ENST00000383738 KRIT1O00522 736 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 DKC1O60832 514 aaKnown RBP eCLIP20.49■□□□□ 0.87
CSPG5-202ENST00000383738 IL1R1P14778 569 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 APBA1Q02410 837 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 TCP11X2Q5H9J9 407 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 ZBTB33Q86T24 672 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 PROM2Q8N271 834 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 U2AF1L4Q8WU68 220 aaKnown RBP20.49■□□□□ 0.87
CSPG5-202ENST00000383738 ANKZF1Q9H8Y5 726 aa20.49■□□□□ 0.87
CSPG5-202ENST00000383738 DMP1Q13316 513 aaPredicted RBP20.48■□□□□ 0.87
CSPG5-202ENST00000383738 PEX26Q7Z412 305 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 SFR1Q86XK3 245 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 SPZ1Q9BXG8 430 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 WDR11Q9BZH6 1224 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 PPP1R2P41236 205 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 LACTBP83111 547 aaPredicted RBP20.48■□□□□ 0.87
CSPG5-202ENST00000383738 C9orf131Q5VYM1 1079 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 CYFIP1Q7L576 1253 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 MS4A14Q96JA4 679 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 ZDHHC15Q96MV8 337 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 NACC1Q96RE7 527 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 ENTPD3O75355 529 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 NTRK3Q16288 839 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 SFMBT2Q5VUG0 894 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 VSIG1Q86XK7 387 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 KCNB2Q92953 911 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 NUP58Q9BVL2 599 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 EXOC7Q9UPT5 735 aa20.48■□□□□ 0.87
CSPG5-202ENST00000383738 DESP17661 470 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.47■□□□□ 0.87
CSPG5-202ENST00000383738 STIM2Q9P246 746 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 AKT3Q9Y243 479 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 ATP2C1P98194 919 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms