RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 CSRNP1Q96S65 589 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 AP5M1Q9H0R1 490 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 TRMT1Q9NXH9 659 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 LRFN2Q9ULH4 789 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 STK38LQ9Y2H1 464 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 RBM8AQ9Y5S9 174 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 FAM25AB3EWG3 89 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 FAM25CB3EWG5 89 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 FAM25GB3EWG6 89 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MAFGO15525 162 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 SHOX2O60902 331 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 CIAO1O76071 339 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 NPEPPSP55786 919 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 DEFA1P59665 94 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 DEFA3P59666 94 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 DLG4P78352 724 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PPP1R7Q15435 360 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 TRMT5Q32P41 509 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 SLC44A4Q53GD3 710 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 FIGNQ5HY92 759 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 CPXCR1Q8N123 301 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 LRRC8CQ8TDW0 803 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 UBLCP1Q8WVY7 318 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 XPO4Q9C0E2 1151 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PRDM16Q9HAZ2 1276 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 GUCA1BQ9UMX6 200 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MFAP3LO75121 409 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MYCP01106 439 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 SLC1A4P43007 532 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MYL6P60660 151 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 GUCY1B3Q02153 619 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 INF2Q27J81 1249 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 TRIM60Q495X7 471 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 TMEM126BQ8IUX1 230 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PSPC1Q8WXF1 523 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 DHX38Q92620 1227 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PALMDQ9NP74 551 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 SCAF8Q9UPN6 1271 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MTMR6Q9Y217 621 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 AP3M1Q9Y2T2 418 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 SNX14Q9Y5W7 946 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 COPG1Q9Y678 874 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 VCAM1P19320 739 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 GRIN1Q05586 938 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 PRR16Q569H4 304 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 RASIP1Q5U651 963 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 MYSM1Q5VVJ2 828 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 CERKQ8TCT0 537 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 POTEMA6NI47 508 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 C16orf96A6NNT2 1141 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 MAGEA8P43361 318 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 ZFP1Q6P2D0 407 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 POTEHQ6S545 545 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 POTEGQ6S5H5 508 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 ARHGAP22Q7Z5H3 698 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 UNC5CLQ8IV45 518 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 CARD6Q9BX69 1037 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 HDAC6Q9UBN7 1215 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 MAD1L1Q9Y6D9 718 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 EPN1Q9Y6I3 576 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-203ENST00000381196 COL15A1P39059 1388 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 LAMA4Q16363 1823 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 XPOTO43592 962 aaKnown RBP5.24□□□□□ -1.57
PTPRD-203ENST00000381196 IMPDH2P12268 514 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 KLHL38Q2WGJ6 581 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 MAP7D3Q8IWC1 876 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 PM20D2Q8IYS1 436 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 DDX17Q92841 729 aaKnown RBP5.24□□□□□ -1.57
PTPRD-203ENST00000381196 PARD6BQ9BYG5 372 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 FRMD4BQ9Y2L6 1034 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 NFE2L3Q9Y4A8 694 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 TMEM2Q9UHN6 1383 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 SSU72P8A0A1W2PR75 194 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 FMNL1O95466 1100 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-203ENST00000381196 KRT3P12035 628 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 IL13P35225 146 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 ASIC1P78348 528 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 CCT2P78371 535 aaKnown RBP5.24□□□□□ -1.57
PTPRD-203ENST00000381196 NLRP14Q86W24 1093 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 PPP2R3CQ969Q6 453 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 SMARCAL1Q9NZC9 954 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 AFF2P51816 1311 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 KCNJ18B7U540 433 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 FCGR1AP12314 374 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 IDO1P14902 403 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 GAP43P17677 238 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 STX1BP61266 288 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 KCNJ12Q14500 433 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 LBRQ14739 615 aaKnown RBP5.24□□□□□ -1.57
PTPRD-203ENST00000381196 SPATS1Q496A3 300 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 PNMA8AQ86V59 439 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-203ENST00000381196 OLFM1Q99784 485 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 INTS9Q9NV88 658 aaKnown RBP5.24□□□□□ -1.57
PTPRD-203ENST00000381196 PAG1Q9NWQ8 432 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 KLF18A0A0U1RQI7 1052 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 PDE8AO60658 829 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 TOMM70O94826 608 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 SNX17Q15036 470 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 TRADDQ15628 312 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 AOC3Q16853 763 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms