RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 NFASCO94856 1347 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 IGSF9BQ9UPX0 1349 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 ITGB1P05556 798 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 RXRAP19793 462 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 GTF2F1P35269 517 aaKnown RBP eCLIP18.27■□□□□ 0.52
VCX3A-201ENST00000381089 SLC26A2P50443 739 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 STAT5BP51692 787 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 TMEM62Q0P6H9 643 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 PAN2Q504Q3 1202 aaKnown RBP18.27■□□□□ 0.52
VCX3A-201ENST00000381089 ODR4Q5SWX8 454 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 RNF135Q8IUD6 432 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 CCDC82Q8N4S0 544 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 EFHBQ8N7U6 833 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 KLHL23Q8NBE8 558 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 LINC01599Q8WXQ3 324 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 MXRA8Q9BRK3 442 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 CELF4Q9BZC1 486 aaKnown RBP18.27■□□□□ 0.52
VCX3A-201ENST00000381089 AAASQ9NRG9 546 aa18.27■□□□□ 0.52
VCX3A-201ENST00000381089 C5orf42Q9H799 3197 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 SMIM35A0A1B0GVV1 85 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 FSD2A1L4K1 749 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 LINC01565O15544 149 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 EYA4O95677 639 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 FOSP01100 380 aaPredicted RBP18.26■□□□□ 0.51
VCX3A-201ENST00000381089 MRE11P49959 708 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 ACTR2P61160 394 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 KRT76Q01546 638 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 NHLH1Q02575 133 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 PLCB4Q15147 1175 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 SPOUT1Q5T280 376 aaKnown RBP18.26■□□□□ 0.51
VCX3A-201ENST00000381089 HFE2Q6ZVN8 426 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 FANCBQ8NB91 859 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 SPPL3Q8TCT6 385 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 POF1BQ8WVV4 589 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 FBXL18Q96ME1 805 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 PCYT2Q99447 389 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 PCDHB7Q9Y5E2 793 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 PCDHB12Q9Y5F1 795 aa18.26■□□□□ 0.51
VCX3A-201ENST00000381089 KDM3AQ9Y4C1 1321 aa18.25■□□□□ 0.51
VCX3A-201ENST00000381089 hCG_1642624A0A1W2PR95 340 aa18.25■□□□□ 0.51
VCX3A-201ENST00000381089 NAPAP54920 295 aa18.25■□□□□ 0.51
VCX3A-201ENST00000381089 NFX1Q12986 1120 aaKnown RBP18.25■□□□□ 0.51
VCX3A-201ENST00000381089 CAMK1Q14012 370 aa18.25■□□□□ 0.51
VCX3A-201ENST00000381089 RTN4RL1Q86UN2 441 aaPredicted RBP18.25■□□□□ 0.51
VCX3A-201ENST00000381089 MICU3Q86XE3 530 aa18.25■□□□□ 0.51
VCX3A-201ENST00000381089 ZBTB10Q96DT7 871 aa18.25■□□□□ 0.51
VCX3A-201ENST00000381089 MSLNLQ96KJ4 702 aa18.25■□□□□ 0.51
VCX3A-201ENST00000381089 IBSPP21815 317 aaPredicted RBP18.24■□□□□ 0.51
VCX3A-201ENST00000381089 NRIP1P48552 1158 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 SARSP49591 514 aaKnown RBP18.24■□□□□ 0.51
VCX3A-201ENST00000381089 UBE3AQ05086 875 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 COASYQ13057 564 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 PKN1Q16512 942 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 CEP55Q53EZ4 464 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 FAM160B1Q5W0V3 765 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 PPP1R18Q6NYC8 613 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 MTHFD1LQ6UB35 978 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 CRIPAKQ8N1N5 446 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 SMRP1Q8NCR6 262 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 MICAL1Q8TDZ2 1067 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 TRAPPC12Q8WVT3 735 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 EDAQ92838 391 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 GLT8D2Q9H1C3 349 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 C1orf112Q9NSG2 853 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 RBM28Q9NW13 759 aaKnown RBP18.24■□□□□ 0.51
VCX3A-201ENST00000381089 GINS2Q9Y248 185 aa18.24■□□□□ 0.51
VCX3A-201ENST00000381089 DENND3A2RUS2 1198 aa18.23■□□□□ 0.51
VCX3A-201ENST00000381089 BACH1O14867 736 aa18.23■□□□□ 0.51
VCX3A-201ENST00000381089 RPS6KA5O75582 802 aa18.23■□□□□ 0.51
VCX3A-201ENST00000381089 DNAJB1P25685 340 aa18.23■□□□□ 0.51
VCX3A-201ENST00000381089 ZNF76P36508 570 aa18.23■□□□□ 0.51
VCX3A-201ENST00000381089 RBM23Q86U06 439 aaKnown RBP18.23■□□□□ 0.51
VCX3A-201ENST00000381089 RAB11FIP4Q86YS3 637 aa18.23■□□□□ 0.51
VCX3A-201ENST00000381089 TLE6Q9H808 572 aa18.23■□□□□ 0.51
VCX3A-201ENST00000381089 RIC8AQ9NPQ8 531 aa18.23■□□□□ 0.51
VCX3A-201ENST00000381089 KIAA1671Q9BY89 1806 aa18.23■□□□□ 0.51
VCX3A-201ENST00000381089 LOXHD1Q8IVV2 1947 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 hCG_1984214I3L0E3 225 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 SLC27A2O14975 620 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 HBP1O60381 514 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 PPFIA3O75145 1194 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 SRGAP2BP0DMP2 458 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 ADCY7P51828 1080 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 AP3B2Q13367 1082 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 TMEM266Q2M3C6 531 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 ADGRD2Q7Z7M1 963 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 SGMS1Q86VZ5 419 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 ZNF713Q8N859 430 aaPredicted RBP18.22■□□□□ 0.51
VCX3A-201ENST00000381089 CDCA3Q99618 268 aaPredicted RBP18.22■□□□□ 0.51
VCX3A-201ENST00000381089 PRRX2Q99811 253 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 ANO3Q9BYT9 981 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 AGO4Q9HCK5 861 aaKnown RBP18.22■□□□□ 0.51
VCX3A-201ENST00000381089 CLEC1BQ9P126 229 aa18.22■□□□□ 0.51
VCX3A-201ENST00000381089 COL1A2P08123 1366 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 TBKBP1A7MCY6 615 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 GPR182O15218 404 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 ATG7O95352 703 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 ARP10275 920 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 KLRC1P26715 233 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms