RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 FAM117AQ9C073 453 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 ZNF576Q9H609 170 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 HDAC6Q9UBN7 1215 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 SLC9A2Q9UBY0 812 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 TBX21Q9UL17 535 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 ZNF215Q9UL58 517 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-202ENST00000380747 NFASCO94856 1347 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 GSTTP1A0A1W2PQM5 241 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 H3BRB1 525 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 HAS3O00219 553 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 IPO5O00410 1097 aaKnown RBP10.46□□□□□ -0.73
HMGN1-202ENST00000380747 EDIL3O43854 480 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 TDP2O95551 362 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 MMP1P03956 469 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 CYP2C9P11712 490 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 CIITAP33076 1130 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 ACTR2P61160 394 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 NR5A1Q13285 461 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 SAFBQ15424 915 aaKnown RBP eCLIP10.46□□□□□ -0.73
HMGN1-202ENST00000380747 PTGISQ16647 500 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 RASIP1Q5U651 963 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 GDF6Q6KF10 455 aaPredicted RBP10.46□□□□□ -0.73
HMGN1-202ENST00000380747 DIS3L2Q8IYB7 885 aaKnown RBP10.46□□□□□ -0.73
HMGN1-202ENST00000380747 GLG1Q92896 1179 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 TIFAQ96CG3 184 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 HIPK3Q9H422 1215 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 TUT1Q9H6E5 874 aaKnown RBP10.46□□□□□ -0.73
HMGN1-202ENST00000380747 TBC1D22BQ9NU19 505 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 TCEAL9Q9UHQ7 104 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 ADGRG1Q9Y653 693 aa10.46□□□□□ -0.73
HMGN1-202ENST00000380747 FAM205CA6NFA0 338 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 BTBD18B2RXH4 712 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 MSH4O15457 936 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 TIMP1P01033 207 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 OATP04181 439 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 SMIM10L2AP0DMW4 78 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 SMIM10L2BP0DMW5 78 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 MARK3P27448 753 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 CYP2C18P33260 490 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 PLA2G5P39877 138 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 EARS2Q5JPH6 523 aaKnown RBP10.45□□□□□ -0.74
HMGN1-202ENST00000380747 MFSD5Q6N075 450 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 NEK8Q86SG6 692 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 METTL3Q86U44 580 aaKnown RBP10.45□□□□□ -0.74
HMGN1-202ENST00000380747 SESTD1Q86VW0 696 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 LENG9Q96B70 501 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 ASB2Q96Q27 587 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 GAS2L1Q99501 681 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-202ENST00000380747 NOC4LQ9BVI4 516 aaKnown RBP10.45□□□□□ -0.74
HMGN1-202ENST00000380747 REPIN1Q9BWE0 567 aaKnown RBP10.45□□□□□ -0.74
HMGN1-202ENST00000380747 SMARCAD1Q9H4L7 1026 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 AZI2Q9H6S1 392 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 THEGQ9P2T0 379 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 DDX25Q9UHL0 483 aaKnown RBP10.45□□□□□ -0.74
HMGN1-202ENST00000380747 GTF2IRD1Q9UHL9 959 aa10.45□□□□□ -0.74
HMGN1-202ENST00000380747 UMODL1Q5DID0 1318 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 CYP3A7-CYP3A51PA0A087WV96 503 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 C17orf102A2RUQ5 167 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 BACH1O14867 736 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 DHX15O43143 795 aaKnown RBP10.44□□□□□ -0.74
HMGN1-202ENST00000380747 MARCH6O60337 910 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 CCNT1O60563 726 aaKnown RBP10.44□□□□□ -0.74
HMGN1-202ENST00000380747 GAS7O60861 476 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 CCNE2O96020 404 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 CYP3A7P24462 503 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 CCL23P55773 120 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 ZNF200P98182 395 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-202ENST00000380747 GNL2Q13823 731 aaKnown RBP10.44□□□□□ -0.74
HMGN1-202ENST00000380747 Q4G0T1 1027 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 MIS18BP1Q6P0N0 1132 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 TMEM199Q8N511 208 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 NLRP7Q8WX94 980 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 GJA10Q969M2 543 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 NAP1L4Q99733 375 aaKnown RBP10.44□□□□□ -0.74
HMGN1-202ENST00000380747 TEKT3Q9BXF9 490 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 ERAP1Q9NZ08 941 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 DAXXQ9UER7 740 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-202ENST00000380747 SMC3Q9UQE7 1217 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 KIF3AQ9Y496 699 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 SAMM50Q9Y512 469 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 MYH7BA7E2Y1 1941 aa10.44□□□□□ -0.74
HMGN1-202ENST00000380747 DOCK5Q9H7D0 1870 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 EMSYQ7Z589 1322 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 PPP1R3GB7ZBB8 358 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 CHMP2AO43633 222 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 SLC37A4O43826 429 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 LGR5O75473 907 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 GNAT1P11488 350 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 GCFC2P16383 781 aaKnown RBP10.43□□□□□ -0.74
HMGN1-202ENST00000380747 ATP2B1P20020 1258 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 STAT5BP51692 787 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 MRPS5P82675 430 aaKnown RBP10.43□□□□□ -0.74
HMGN1-202ENST00000380747 KRT76Q01546 638 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 PPIGQ13427 754 aaKnown RBP eCLIP10.43□□□□□ -0.745e-19■■□□□ 12
HMGN1-202ENST00000380747 BFSP2Q13515 415 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 LRCH2Q5VUJ6 765 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 FAM160B1Q5W0V3 765 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 ZNF746Q6NUN9 644 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-202ENST00000380747 MOXD1Q6UVY6 613 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms