RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 CHMP2AO43633 222 aa22.03■■□□□ 1.12
EBF1-202ENST00000380654 ENTPD3O75355 529 aa22.03■■□□□ 1.12
EBF1-202ENST00000380654 GCNT3O95395 438 aa22.03■■□□□ 1.12
EBF1-202ENST00000380654 ASIC2Q16515 512 aa22.03■■□□□ 1.12
EBF1-202ENST00000380654 STYK1Q6J9G0 422 aa22.03■■□□□ 1.12
EBF1-202ENST00000380654 RNF10Q8N5U6 811 aaKnown RBP22.03■■□□□ 1.12
EBF1-202ENST00000380654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.03■■□□□ 1.12
EBF1-202ENST00000380654 PACSIN2Q9UNF0 486 aaPredicted RBP22.03■■□□□ 1.12
EBF1-202ENST00000380654 RABGAP1Q9Y3P9 1069 aa22.03■■□□□ 1.12
EBF1-202ENST00000380654 CLRN2A0PK11 232 aa22.02■■□□□ 1.12
EBF1-202ENST00000380654 MCTP2Q6DN12 878 aa22.02■■□□□ 1.12
EBF1-202ENST00000380654 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.02■■□□□ 1.12
EBF1-202ENST00000380654 RBM12Q9NTZ6 932 aaKnown RBP22.02■■□□□ 1.12
EBF1-202ENST00000380654 STAT2P52630 851 aa22.02■■□□□ 1.12
EBF1-202ENST00000380654 NAB2Q15742 525 aa22.02■■□□□ 1.12
EBF1-202ENST00000380654 KIAA0753Q2KHM9 967 aa22.02■■□□□ 1.12
EBF1-202ENST00000380654 CCDC174Q6PII3 467 aa22.02■■□□□ 1.12
EBF1-202ENST00000380654 SAMD1Q6SPF0 538 aaPredicted RBP22.02■■□□□ 1.12
EBF1-202ENST00000380654 FRMD5Q7Z6J6 570 aa22.02■■□□□ 1.12
EBF1-202ENST00000380654 ACBD3Q9H3P7 528 aa22.02■■□□□ 1.12
EBF1-202ENST00000380654 PSD3Q9NYI0 1048 aa22.02■■□□□ 1.12
EBF1-202ENST00000380654 RNF40O75150 1001 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 AFPP02771 609 aaKnown RBP22.01■■□□□ 1.11
EBF1-202ENST00000380654 PTK2Q05397 1052 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 ITIH3Q06033 890 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 TCERG1LQ5VWI1 586 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 CC2D2BQ6DHV5 1058 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 MED4Q9NPJ6 270 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 PDXKO00764 312 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 NR3C1P04150 777 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 CYP3A4P08684 503 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 XRCC5P13010 732 aaKnown RBP22.01■■□□□ 1.11
EBF1-202ENST00000380654 UCHL3P15374 230 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 PON1P27169 355 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 AARSP49588 968 aaKnown RBP eCLIP22.01■■□□□ 1.11
EBF1-202ENST00000380654 RINT1Q6NUQ1 792 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 TPH2Q8IWU9 490 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 FLAD1Q8NFF5 587 aa22.01■■□□□ 1.11
EBF1-202ENST00000380654 AENQ8WTP8 325 aaKnown RBP22.01■■□□□ 1.11
EBF1-202ENST00000380654 POLR3CQ9BUI4 534 aaPredicted RBP22.01■■□□□ 1.11
EBF1-202ENST00000380654 AJAP1Q9UKB5 411 aaPredicted RBP22.01■■□□□ 1.11
EBF1-202ENST00000380654 PIK3CDO00329 1044 aa22■■□□□ 1.11
EBF1-202ENST00000380654 TBCAO75347 108 aaKnown RBP22■■□□□ 1.11
EBF1-202ENST00000380654 EYA4O95677 639 aa22■■□□□ 1.11
EBF1-202ENST00000380654 CCDC70Q6NSX1 233 aa22■■□□□ 1.11
EBF1-202ENST00000380654 ZNF571Q7Z3V5 609 aaPredicted RBP22■■□□□ 1.11
EBF1-202ENST00000380654 IRF2BP2Q7Z5L9 587 aa22■■□□□ 1.11
EBF1-202ENST00000380654 RBM46Q8TBY0 533 aaKnown RBP22■■□□□ 1.11
EBF1-202ENST00000380654 C7orf43Q8WVR3 580 aa22■■□□□ 1.11
EBF1-202ENST00000380654 FAM204AQ9H8W3 233 aa22■■□□□ 1.11
EBF1-202ENST00000380654 CALUO43852 315 aaPredicted RBP22■■□□□ 1.11
EBF1-202ENST00000380654 GGCXP38435 758 aa22■■□□□ 1.11
EBF1-202ENST00000380654 ZYXQ15942 572 aaKnown RBP22■■□□□ 1.11
EBF1-202ENST00000380654 EXOC3L4Q17RC7 722 aa22■■□□□ 1.11
EBF1-202ENST00000380654 OTOP1Q7RTM1 612 aa22■■□□□ 1.11
EBF1-202ENST00000380654 DYDC2Q96IM9 177 aa22■■□□□ 1.11
EBF1-202ENST00000380654 HSD17B14Q9BPX1 270 aa22■■□□□ 1.11
EBF1-202ENST00000380654 TYW1Q9NV66 732 aaKnown RBP22■■□□□ 1.11
EBF1-202ENST00000380654 CALCOCO1Q9P1Z2 691 aa22■■□□□ 1.11
EBF1-202ENST00000380654 PCDHB13Q9Y5F0 798 aa22■■□□□ 1.11
EBF1-202ENST00000380654 A0A0U1RQG5 324 aaPredicted RBP21.99■■□□□ 1.11
EBF1-202ENST00000380654 PPIP5K2O43314 1243 aa21.99■■□□□ 1.11
EBF1-202ENST00000380654 SLITRK3O94933 977 aa21.99■■□□□ 1.11
EBF1-202ENST00000380654 NMT1P30419 496 aaKnown RBP21.99■■□□□ 1.11
EBF1-202ENST00000380654 PAFAH1B1P43034 410 aa21.99■■□□□ 1.11
EBF1-202ENST00000380654 ZC2HC1CQ53FD0 456 aaPredicted RBP21.99■■□□□ 1.11
EBF1-202ENST00000380654 KSR1Q8IVT5 923 aa21.99■■□□□ 1.11
EBF1-202ENST00000380654 CDAN1Q8IWY9 1227 aa21.99■■□□□ 1.11
EBF1-202ENST00000380654 SPAG5Q96R06 1193 aa21.99■■□□□ 1.11
EBF1-202ENST00000380654 PLEKHA4Q9H4M7 779 aa21.99■■□□□ 1.11
EBF1-202ENST00000380654 AGPSO00116 658 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 TGFB1I1O43294 461 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 BMT2Q1RMZ1 405 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 LRCH2Q5VUJ6 765 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 GJB7Q6PEY0 223 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 KIF13BQ9NQT8 1826 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 CAPN2P17655 700 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 EPHA7Q15375 998 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 ZSCAN26Q16670 478 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 SLC35C1Q96A29 364 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 GOLPH3Q9H4A6 298 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 LUC7LQ9NQ29 371 aaKnown RBP21.98■■□□□ 1.11
EBF1-202ENST00000380654 PLCB1Q9NQ66 1216 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 ZMYM2Q9UBW7 1377 aa21.98■■□□□ 1.11
EBF1-202ENST00000380654 GRID2IPA4D2P6 1211 aa21.97■■□□□ 1.11
EBF1-202ENST00000380654 RNASE9P60153 205 aaKnown RBP21.97■■□□□ 1.11
EBF1-202ENST00000380654 TAF3Q5VWG9 929 aa21.97■■□□□ 1.11
EBF1-202ENST00000380654 SND1Q7KZF4 910 aaKnown RBP eCLIP21.97■■□□□ 1.11
EBF1-202ENST00000380654 WRAP73Q9P2S5 460 aaPredicted RBP21.97■■□□□ 1.11
EBF1-202ENST00000380654 PCDHGC5Q9Y5F6 944 aa21.97■■□□□ 1.11
EBF1-202ENST00000380654 RBBP6Q7Z6E9 1792 aaKnown RBP21.97■■□□□ 1.11
EBF1-202ENST00000380654 C21orf2O43822 256 aa21.97■■□□□ 1.11
EBF1-202ENST00000380654 PSMD10O75832 226 aa21.97■■□□□ 1.11
EBF1-202ENST00000380654 HMGB2P26583 209 aaKnown RBP21.97■■□□□ 1.11
EBF1-202ENST00000380654 COG2Q14746 738 aa21.97■■□□□ 1.11
EBF1-202ENST00000380654 MYCT1Q8N699 235 aa21.97■■□□□ 1.11
EBF1-202ENST00000380654 ARHGEF10LQ9HCE6 1279 aa21.97■■□□□ 1.11
EBF1-202ENST00000380654 SIX2Q9NPC8 291 aa21.97■■□□□ 1.11
EBF1-202ENST00000380654 STIM2Q9P246 746 aa21.97■■□□□ 1.11
EBF1-202ENST00000380654 EPB41P11171 864 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms