RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TMEM47Q9BQJ4 181 aa17.27■□□□□ 0.36
COL2A1-202ENST00000380518 ASNSP08243 561 aa17.27■□□□□ 0.35
COL2A1-202ENST00000380518 PEX3P56589 373 aa17.27■□□□□ 0.35
COL2A1-202ENST00000380518 THOC5Q13769 683 aaKnown RBP17.27■□□□□ 0.35
COL2A1-202ENST00000380518 ARMCX2Q7L311 632 aa17.27■□□□□ 0.35
COL2A1-202ENST00000380518 SIX6OS1Q8N1H7 587 aa17.27■□□□□ 0.35
COL2A1-202ENST00000380518 DNAJC12Q9UKB3 198 aa17.27■□□□□ 0.35
COL2A1-202ENST00000380518 PALLDQ8WX93 1383 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 ZBED1O96006 694 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 OSTNP61366 133 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 ERICH1Q86X53 443 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 PYROXD1Q8WU10 500 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 RPF1Q9H9Y2 349 aaKnown RBP17.26■□□□□ 0.35
COL2A1-202ENST00000380518 CPSF3Q9UKF6 684 aaKnown RBP17.26■□□□□ 0.35
COL2A1-202ENST00000380518 NEDD4P46934 1319 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 EFHD1Q9BUP0 239 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 CYP27B1O15528 508 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 JAK3P52333 1124 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 HLFQ16534 295 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL2A1-202ENST00000380518 SH3RF3Q8TEJ3 882 aaPredicted RBP17.26■□□□□ 0.35
COL2A1-202ENST00000380518 PPWD1Q96BP3 646 aaKnown RBP17.26■□□□□ 0.35
COL2A1-202ENST00000380518 SPDL1Q96EA4 605 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 IQCB1Q15051 598 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 ANKRD20A4Q4UJ75 823 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 ANKRD20A8PQ5CZ79 823 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 ANKRD20A2Q5SQ80 823 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 ANKRD20A1Q5TYW2 823 aa17.26■□□□□ 0.35
COL2A1-202ENST00000380518 MB21D2Q8IYB1 491 aaPredicted RBP17.26■□□□□ 0.35
COL2A1-202ENST00000380518 ORC2Q13416 577 aaPredicted RBP17.25■□□□□ 0.35
COL2A1-202ENST00000380518 FAM133BQ5BKY9 247 aaKnown RBP17.25■□□□□ 0.35
COL2A1-202ENST00000380518 MIGA2Q7L4E1 593 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 MYLK4Q86YV6 388 aaPredicted RBP17.25■□□□□ 0.35
COL2A1-202ENST00000380518 HEXIM2Q96MH2 286 aaKnown RBP17.25■□□□□ 0.35
COL2A1-202ENST00000380518 NUDCD1Q96RS6 583 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 PRDM15P57071 1507 aaPredicted RBP17.25■□□□□ 0.35
COL2A1-202ENST00000380518 IQANK1A0A1B0GTG1 560 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 SMIM24O75264 130 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 TOM1L1O75674 476 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 GH2P01242 217 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 STMN1P16949 149 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 RFX1P22670 979 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 TOGARAM2Q6ZUX3 1019 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 CYB5R4Q7L1T6 521 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 OSBPL5Q9H0X9 879 aaPredicted RBP17.25■□□□□ 0.35
COL2A1-202ENST00000380518 PCDHA6Q9UN73 950 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 PCDHA8Q9Y5H6 950 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 SYNGAP1Q96PV0 1343 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 ADGRL3Q9HAR2 1447 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 POTEMA6NI47 508 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 XPAP23025 273 aaPredicted RBP17.25■□□□□ 0.35
COL2A1-202ENST00000380518 ALX1Q15699 326 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 TBC1D9BQ66K14 1250 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 BZW1Q7L1Q6 419 aaKnown RBP17.25■□□□□ 0.35
COL2A1-202ENST00000380518 EEPD1Q7L9B9 569 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 THEGQ9P2T0 379 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 TTI1O43156 1089 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 PALMO75781 387 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 CYP2D6P10635 497 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 PRDX5P30044 214 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 E2F5Q15329 346 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 MCPH1Q8NEM0 835 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 TTC1Q99614 292 aa17.25■□□□□ 0.35
COL2A1-202ENST00000380518 SFI1A8K8P3 1242 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 ENAHQ8N8S7 591 aaPredicted RBP17.24■□□□□ 0.35
COL2A1-202ENST00000380518 FBXO41Q8TF61 875 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 FAM20AQ96MK3 541 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 TJP3O95049 919 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 NR3C1P04150 777 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 SRGAP2CP0DJJ0 459 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 ZSCAN20P17040 1043 aaPredicted RBP17.24■□□□□ 0.35
COL2A1-202ENST00000380518 SPOPLQ6IQ16 392 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 RNF207Q6ZRF8 634 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 XXYLT1Q8NBI6 393 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 PIGOQ8TEQ8 1089 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 MYCBPQ99417 103 aaPredicted RBP17.24■□□□□ 0.35
COL2A1-202ENST00000380518 KIAA1586Q9HCI6 787 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 ADAM22Q9P0K1 906 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 TRIM49BA6NDI0 452 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 USP17L5A8MUK1 530 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 HIBCHQ6NVY1 386 aaPredicted RBP17.24■□□□□ 0.35
COL2A1-202ENST00000380518 PPP1R18Q6NYC8 613 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 SCARA5Q6ZMJ2 495 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 SFR1Q86XK3 245 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL2A1-202ENST00000380518 GOLPH3LQ9H4A5 285 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 RPS6KA4O75676 772 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 ACSL3O95573 720 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 PRCPP42785 496 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 SLFNL1Q499Z3 407 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 ZNF667Q5HYK9 610 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 SAMD9LQ8IVG5 1584 aa17.24■□□□□ 0.35
COL2A1-202ENST00000380518 VGLL3A8MV65 326 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 SPECC1L-ADORA2AF8WAN1 911 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 Q3C1V9 767 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 RC3H1Q5TC82 1133 aaKnown RBP17.23■□□□□ 0.35
COL2A1-202ENST00000380518 GDAP1Q8TB36 358 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 LY9Q9HBG7 655 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 ATP8B3O60423 1300 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 CDHR2Q9BYE9 1310 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms