RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 RCAN1P53805 252 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 BBS9Q3SYG4 887 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 AGGF1Q8N302 714 aaeCLIP18.34■□□□□ 0.534e-8■■■□□ 15.1
COL4A3BP-203ENST00000380494 JDP2Q8WYK2 163 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 PLEKHG1Q9ULL1 1385 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 KRT38O76015 456 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 AGTP01019 485 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 TMOD1P28289 359 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 MMS19Q96T76 1030 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 PPP1R12AO14974 1030 aaPredicted RBP18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 GNPATO15228 680 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 CCDC22O60826 627 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 NFRKBQ6P4R8 1299 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 MLXIPQ9HAP2 919 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 PLA2G4BP0C869 781 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 FAM47EQ6ZV65 393 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 BCAMP50895 628 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 TTC13Q8NBP0 860 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 TTC17Q96AE7 1141 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 TRPC5Q9UL62 973 aaPredicted RBP18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 AGBL2Q5U5Z8 902 aa18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 SPOPLQ6IQ16 392 aa18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 ACAD11Q709F0 780 aa18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 SPATA21Q7Z572 469 aa18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 ANKRD36BP1Q96IX9 119 aa18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 KPNA7A9QM74 516 aa18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 BYSLQ13895 437 aaKnown RBP18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 LRRC47Q8N1G4 583 aaKnown RBP18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 AMNQ9BXJ7 453 aa18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 HPCAL4Q9UM19 191 aa18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 SATB2Q9UPW6 733 aa18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 TRAF3IP3Q9Y228 551 aa18.33■□□□□ 0.53
COL4A3BP-203ENST00000380494 BRAFP15056 766 aa18.33■□□□□ 0.52
COL4A3BP-203ENST00000380494 GUCY1A3Q02108 690 aa18.33■□□□□ 0.52
COL4A3BP-203ENST00000380494 ITKQ08881 620 aa18.33■□□□□ 0.52
COL4A3BP-203ENST00000380494 PCDHA1Q9Y5I3 950 aa18.33■□□□□ 0.52
COL4A3BP-203ENST00000380494 HNRNPDLO14979 420 aaKnown RBP18.33■□□□□ 0.52
COL4A3BP-203ENST00000380494 ATP1A1P05023 1023 aaKnown RBP18.33■□□□□ 0.52
COL4A3BP-203ENST00000380494 HNRNPCP07910 306 aaKnown RBP eCLIP18.33■□□□□ 0.52
COL4A3BP-203ENST00000380494 MXI1P50539 228 aa18.33■□□□□ 0.52
COL4A3BP-203ENST00000380494 THOC5Q13769 683 aaKnown RBP18.33■□□□□ 0.52
COL4A3BP-203ENST00000380494 RARS2Q5T160 578 aaKnown RBP18.33■□□□□ 0.52
COL4A3BP-203ENST00000380494 ITIH6Q6UXX5 1313 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 ZYXQ15942 572 aaKnown RBP18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 FBXL13Q8NEE6 735 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 FAM161BQ96MY7 647 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 ARHGEF9O43307 516 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 NEK2P51955 445 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 CYP4A11Q02928 519 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 GFPT1Q06210 699 aaPredicted RBP18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 ORC2Q13416 577 aaPredicted RBP18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 FBXW10Q5XX13 1052 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 CPXCR1Q8N123 301 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 CABLES1Q8TDN4 633 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 WDR24Q96S15 920 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 NACA2Q9H009 215 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 SENP1Q9P0U3 644 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 PSMD7P51665 324 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 GPC5P78333 572 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 CUL3Q13618 768 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 CCT8L2Q96SF2 557 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 ADPGKQ9BRR6 497 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 EPC1Q9H2F5 836 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 PARVGQ9HBI0 331 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 IRAK4Q9NWZ3 460 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 SNX5Q9Y5X3 404 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 CLIC2O15247 247 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 ADORA1P30542 326 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 ARL4AP40617 200 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 POLGP54098 1239 aaPredicted RBP18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 KLC1Q07866 573 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 KLC3Q6P597 504 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 C3orf20Q8ND61 904 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 RASGRP4Q8TDF6 673 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 HNRNPLLQ8WVV9 542 aaKnown RBP18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 SNF8Q96H20 258 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 NRBP2Q9NSY0 501 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 TESPA1A2RU30 521 aaPredicted RBP18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 TRIM66O15016 1216 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 E4F1Q66K89 784 aaPredicted RBP18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 BZW1Q7L1Q6 419 aaKnown RBP18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 EDEM3Q9BZQ6 932 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 TRPV6Q9H1D0 765 aa18.32■□□□□ 0.52
COL4A3BP-203ENST00000380494 PVALEFA0A1B0GWK0 134 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 ZBTB22O15209 634 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 TAC1P20366 129 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 SERPINB4P48594 390 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 RPS8P62241 208 aaKnown RBP18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 SPATA4Q8NEY3 305 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 KLC2Q9H0B6 622 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 FBXL5Q9UKA1 691 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 KCNQ3O43525 872 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 TRMT10CQ7L0Y3 403 aaKnown RBP18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 SUPT20HQ8NEM7 779 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 OATP04181 439 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 PHKA1P46020 1223 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 DYNLT1P63172 113 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 PAIP2BQ9ULR5 123 aaKnown RBP18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 ANGPTL3Q9Y5C1 460 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 ZBBXA8MT70 800 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms