RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 ASPRV1Q53RT3 343 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 TMED8Q6PL24 325 aaPredicted RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 AZI2Q9H6S1 392 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 HAUS2Q9NVX0 235 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 PVALEFA0A1B0GWK0 134 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 FAM153BP0C7A2 387 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 KLRC1P26715 233 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 LACTBP83111 547 aaPredicted RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 MYL7Q01449 175 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 FAM153CQ494X1 144 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 INTS8Q75QN2 995 aaKnown RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 FAM153AQ9UHL3 310 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 SNX24Q9Y343 169 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 RABGAP1Q9Y3P9 1069 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 GRID2IPA4D2P6 1211 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 GMNCA6NCL1 334 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L10C9JJH3 530 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 SLC37A4O43826 429 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 TTLL1O95922 423 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 HOXA13P31271 388 aaPredicted RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 SP4Q02446 784 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 CTTNQ14247 550 aaKnown RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 ZRSR2Q15696 482 aaKnown RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 ZKSCAN8Q15776 578 aaPredicted RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 GUF1Q8N442 669 aaKnown RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 TSEN2Q8NCE0 465 aaKnown RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 PSMD1Q99460 953 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 FMO2Q99518 471 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 TRIM51Q9BSJ1 452 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 BZW2Q9Y6E2 419 aaKnown RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 ARHGEF35A5YM69 484 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 MEFVO15553 781 aaPredicted RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 GLI1P08151 1106 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 PPP4R3AQ6IN85 833 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 DUSP9Q99956 384 aaKnown RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 ZMYND12Q9H0C1 365 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 CD248Q9HCU0 757 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 GGT7Q9UJ14 662 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 CCDC169A6NNP5 214 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 BCRP11274 1271 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 RNF10Q8N5U6 811 aaKnown RBP12.36□□□□□ -0.43
SMAD9-202ENST00000379826 CCDC77Q9BR77 488 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 SERPINB2P05120 415 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 PPP2R2AP63151 447 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 PLCB3Q01970 1234 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 FAM186BQ8IYM0 893 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMAD9-202ENST00000379826 A0A1B0GUA9 196 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 PHF20L1A8MW92 1017 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 PPP1R37O75864 691 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 COPB2P35606 906 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 AMPD2Q01433 879 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 GRB10Q13322 594 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 SPICE1Q8N0Z3 855 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 PIGOQ8TEQ8 1089 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 CELF4Q9BZC1 486 aaKnown RBP12.36□□□□□ -0.43
SMAD9-202ENST00000379826 ODF2LQ9ULJ1 636 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 PNMA6FA0A0J9YX94 578 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 MMEP08473 750 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 FERP16591 822 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
SMAD9-202ENST00000379826 TBC1D1Q86TI0 1168 aaPredicted RBP12.36□□□□□ -0.43
SMAD9-202ENST00000379826 RTKN2Q8IZC4 609 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 CCDC63Q8NA47 563 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 KIAA0895Q8NCT3 520 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 AENQ8WTP8 325 aaKnown RBP12.36□□□□□ -0.43
SMAD9-202ENST00000379826 ERGIC2Q96RQ1 377 aa12.36□□□□□ -0.43
SMAD9-202ENST00000379826 ELAC2Q9BQ52 826 aaKnown RBP12.36□□□□□ -0.43
SMAD9-202ENST00000379826 K7ENM7 598 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 TTI1O43156 1089 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 SETDB1Q15047 1291 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 TTMPQ5BVD1 217 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 ADGRF4Q8IZF3 695 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 SPATA20Q8TB22 786 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 MLXIPLQ9NP71 852 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 KLC4Q9NSK0 619 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 KBTBD4Q9NVX7 518 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 TBK1Q9UHD2 729 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 CCDC6Q16204 474 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 UAP1Q16222 522 aaPredicted RBP12.35□□□□□ -0.43
SMAD9-202ENST00000379826 TRIM68Q6AZZ1 485 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 HIBCHQ6NVY1 386 aaPredicted RBP12.35□□□□□ -0.43
SMAD9-202ENST00000379826 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMAD9-202ENST00000379826 LMNB1P20700 586 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 TTBK2Q6IQ55 1244 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 GJB7Q6PEY0 223 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 STX2P32856 288 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 CREG2Q8IUH2 290 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 PROM2Q8N271 834 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 HVCN1Q96D96 273 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 C5P01031 1676 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 FAM196BA6NMK8 535 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 SLC18A3Q16572 532 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 PTGISQ16647 500 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 TRIM7Q9C029 511 aa12.35□□□□□ -0.43
SMAD9-202ENST00000379826 CEP83Q9Y592 693 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms