RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 FAF2Q96CS3 445 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 PSTPIP2Q9H939 334 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 A0A0G2JND7 137 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 PSMA3P25788 255 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 ATP12AP54707 1039 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 MAPRE1Q15691 268 aaKnown RBP14.23□□□□□ -0.13
HIPK3-202ENST00000379016 LRRC47Q8N1G4 583 aaKnown RBP14.23□□□□□ -0.13
HIPK3-202ENST00000379016 TUBGCP2Q9BSJ2 902 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 SLC24A3Q9HC58 644 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 ATP6V1C1P21283 382 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 SOX11P35716 441 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 RERGLQ9H628 205 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 SLC39A2Q9NP94 309 aa14.23□□□□□ -0.13
HIPK3-202ENST00000379016 EXOC1LA0A1B0GW35 172 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 DYTNA2CJ06 578 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 PCIF1Q9H4Z3 704 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 GUCA1AP43080 201 aaPredicted RBP14.22□□□□□ -0.13
HIPK3-202ENST00000379016 STAG2Q8N3U4 1231 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 PLEKHA8Q96JA3 519 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 CFAP65Q6ZU64 1925 aaKnown RBP14.22□□□□□ -0.13
HIPK3-202ENST00000379016 TMEM191CA6NGB0 347 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 ITGA6P23229 1130 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 UXS1Q8NBZ7 420 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 GINS4Q9BRT9 223 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 MED7O43513 233 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 FYNP06241 537 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 BTN2A1Q7KYR7 527 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 AGR3Q8TD06 166 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 PYROXD1Q8WU10 500 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 REXO4Q9GZR2 422 aaKnown RBP14.22□□□□□ -0.13
HIPK3-202ENST00000379016 CCDC78A2IDD5 438 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 MYO1GB0I1T2 1018 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 MYL3P08590 195 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 CXCR5P32302 372 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 CLCN1P35523 988 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 MFAP3P55082 362 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 FAM173BQ6P4H8 233 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 MFN1Q8IWA4 741 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.22□□□□□ -0.13
HIPK3-202ENST00000379016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.22□□□□□ -0.13
HIPK3-202ENST00000379016 CBX8Q9HC52 389 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 ZBED1O96006 694 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 S100A5P33763 92 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 VPS39Q96JC1 886 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 TESK2Q96S53 571 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 AURKCQ9UQB9 309 aa14.22□□□□□ -0.13
HIPK3-202ENST00000379016 DIS3L2Q8IYB7 885 aaKnown RBP14.21□□□□□ -0.13
HIPK3-202ENST00000379016 GYG2O15488 501 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 CBFBQ13951 182 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 ITPRIPL1Q6GPH6 555 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 PPIEQ9UNP9 301 aaKnown RBP14.21□□□□□ -0.13
HIPK3-202ENST00000379016 LMTK3Q96Q04 1460 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 RSPH10B2B2RC85 870 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 RSPH10BP0C881 870 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 RFX3P48380 749 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 MYO1EQ12965 1108 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 SLC25A24Q6NUK1 477 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 LRRC8BQ6P9F7 803 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 ZNF556Q9HAH1 456 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 CCDC87Q9NVE4 849 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 KIF21BO75037 1637 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 POTEFA5A3E0 1075 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 MAPK13O15264 365 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 OSBPP22059 807 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 C1orf146Q5VVC0 180 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 DNAJC24Q6P3W2 148 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 PLA2G4DQ86XP0 818 aa14.21□□□□□ -0.13
HIPK3-202ENST00000379016 KLHL8Q9P2G9 620 aaPredicted RBP14.21□□□□□ -0.13
HIPK3-202ENST00000379016 NKX1-1Q15270 411 aaPredicted RBP14.21□□□□□ -0.14
HIPK3-202ENST00000379016 THEM5Q8N1Q8 247 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 GALNT8Q9NY28 637 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 MRPL11Q9Y3B7 192 aaKnown RBP14.21□□□□□ -0.14
HIPK3-202ENST00000379016 PYGMP11217 842 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 TMPRSS15P98073 1019 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 BBS9Q3SYG4 887 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 KRT78Q8N1N4 520 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 ANKRD13CQ8N6S4 541 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 TTC8Q8TAM2 541 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 KCNV2Q8TDN2 545 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 HES6Q96HZ4 224 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 RUNDC3BQ96NL0 473 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 IMPACTQ9P2X3 320 aa14.21□□□□□ -0.14
HIPK3-202ENST00000379016 CUX1P39880 1505 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 PEX1O43933 1283 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 SERPINB10P48595 397 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 ALDH6A1Q02252 535 aaKnown RBP14.2□□□□□ -0.14
HIPK3-202ENST00000379016 EXOC3L4Q17RC7 722 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 PASD1Q8IV76 773 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 SH3GL1Q99961 368 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 LINC00854A0A1B0GVQ3 168 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 MTRF1O75570 445 aaKnown RBP14.2□□□□□ -0.14
HIPK3-202ENST00000379016 GUCY2CP25092 1073 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 HSD3B2P26439 372 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 TUBB6Q9BUF5 446 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 ANGEL1Q9UNK9 670 aaKnown RBP14.2□□□□□ -0.14
HIPK3-202ENST00000379016 FAM32AQ9Y421 112 aaKnown RBP14.2□□□□□ -0.14
HIPK3-202ENST00000379016 CTNND1O60716 968 aaKnown RBP14.2□□□□□ -0.14
HIPK3-202ENST00000379016 NFX1Q12986 1120 aaKnown RBP14.2□□□□□ -0.14
HIPK3-202ENST00000379016 ADAM9Q13443 819 aa14.2□□□□□ -0.14
HIPK3-202ENST00000379016 C6orf118Q5T5N4 469 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms