RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 FBXL16Q8N461 479 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 TSGA10Q9BZW7 698 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 FAM204AQ9H8W3 233 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 LIMA1Q9UHB6 759 aaKnown RBP12.15□□□□□ -0.46
HDAC6-203ENST00000376619 GOLGA6L10A0A0M3HER8 536 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 EPHB6O15197 1021 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 ARP10275 920 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 PPP1R2P41236 205 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 CASP8Q14790 479 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 IFI16Q16666 785 aaKnown RBP12.15□□□□□ -0.46
HDAC6-203ENST00000376619 PADI6Q6TGC4 694 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 IMPG2Q9BZV3 1241 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 ZNF70Q9UC06 446 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-203ENST00000376619 TISP43B9A030 160 aa12.15□□□□□ -0.47
HDAC6-203ENST00000376619 MCM3P25205 808 aa12.15□□□□□ -0.47
HDAC6-203ENST00000376619 SLCO1A2P46721 670 aa12.15□□□□□ -0.47
HDAC6-203ENST00000376619 SARSP49591 514 aaKnown RBP12.15□□□□□ -0.47
HDAC6-203ENST00000376619 POLGP54098 1239 aaPredicted RBP12.15□□□□□ -0.47
HDAC6-203ENST00000376619 SEPT7Q16181 437 aaKnown RBP12.15□□□□□ -0.47
HDAC6-203ENST00000376619 WHAMMP3Q1A5X7 153 aa12.15□□□□□ -0.47
HDAC6-203ENST00000376619 CEP85LQ5SZL2 805 aa12.15□□□□□ -0.47
HDAC6-203ENST00000376619 DLK2Q6UY11 383 aa12.15□□□□□ -0.47
HDAC6-203ENST00000376619 SMAP1Q8IYB5 467 aaPredicted RBP12.15□□□□□ -0.47
HDAC6-203ENST00000376619 COG1Q8WTW3 980 aa12.15□□□□□ -0.47
HDAC6-203ENST00000376619 SYT17Q9BSW7 474 aa12.15□□□□□ -0.47
HDAC6-203ENST00000376619 MRFAP1Q9Y605 127 aa12.15□□□□□ -0.47
HDAC6-203ENST00000376619 LIG4P49917 911 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 TNNC1P63316 161 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 COG2Q14746 738 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 SWSAP1Q6NVH7 229 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 SCARA5Q6ZMJ2 495 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 FAM76AQ8TAV0 307 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 NAP1L4Q99733 375 aaKnown RBP12.14□□□□□ -0.47
HDAC6-203ENST00000376619 RUSC1Q9BVN2 902 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 PACSIN1Q9BY11 444 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 DDX47Q9H0S4 455 aaKnown RBP12.14□□□□□ -0.47
HDAC6-203ENST00000376619 NFIBO00712 420 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 TTI2Q6NXR4 508 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 RNF207Q6ZRF8 634 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 FGFBP2Q9BYJ0 223 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 KCNK9Q9NPC2 374 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 FAM86B1E9PN63 330 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 NKRFO15226 690 aaKnown RBP eCLIP12.14□□□□□ -0.47
HDAC6-203ENST00000376619 FAM86B2P0C5J1 330 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 CCDC172P0C7W6 258 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 MYL7Q01449 175 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 STRN3Q13033 797 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 BAATQ14032 418 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-203ENST00000376619 KNOP1Q1ED39 458 aaKnown RBP12.14□□□□□ -0.47
HDAC6-203ENST00000376619 SLC35G1Q2M3R5 365 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 CEP55Q53EZ4 464 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 MICALL2Q8IY33 904 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 GUF1Q8N442 669 aaKnown RBP12.14□□□□□ -0.47
HDAC6-203ENST00000376619 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.14□□□□□ -0.47
HDAC6-203ENST00000376619 PPP1R13LQ8WUF5 828 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 NACC1Q96RE7 527 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 ASIC3Q9UHC3 531 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 DNAJC12Q9UKB3 198 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 TRPC6Q9Y210 931 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 FHOD1Q9Y613 1164 aa12.14□□□□□ -0.47
HDAC6-203ENST00000376619 MSH4O15457 936 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 MYCP01106 439 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-203ENST00000376619 PSMC2P35998 433 aaKnown RBP12.13□□□□□ -0.47
HDAC6-203ENST00000376619 WDR44Q5JSH3 913 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 NLGN2Q8NFZ4 835 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 LRRC1Q9BTT6 524 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 WDR11Q9BZH6 1224 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 KBTBD4Q9NVX7 518 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 NXF1Q9UBU9 619 aaKnown RBP12.13□□□□□ -0.47
HDAC6-203ENST00000376619 CAPN6Q9Y6Q1 641 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 FAM208AQ9UK61 1670 aaKnown RBP12.13□□□□□ -0.47
HDAC6-203ENST00000376619 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-203ENST00000376619 LRRC63Q05C16 580 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 TRIM65Q6PJ69 517 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 DEPTORQ8TB45 409 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 PNKPQ96T60 521 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 FAM118BQ9BPY3 351 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 APOL6Q9BWW8 343 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 A0A1W2PRG0 241 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 INO80B-WBP1J3KQ70 363 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 CASP5P51878 434 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 ECM1Q16610 540 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 VTI1AQ96AJ9 217 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 PNMA5Q96PV4 448 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 INO80BQ9C086 356 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-203ENST00000376619 HSD3B7Q9H2F3 369 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 PLCB1Q9NQ66 1216 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 KMT5AQ9NQR1 393 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 RNF146Q9NTX7 359 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 CALCOCO1Q9P1Z2 691 aa12.13□□□□□ -0.47
HDAC6-203ENST00000376619 IL1R1P14778 569 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 NPY5RQ15761 445 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 ZSCAN26Q16670 478 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 KRT71Q3SY84 523 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 HP1BP3Q5SSJ5 553 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-203ENST00000376619 LMBR1Q8WVP7 490 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 SPIRE2Q8WWL2 714 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 GABBR1Q9UBS5 961 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms