RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 KLRC4O43908 158 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 HEXIM1O94992 359 aaKnown RBP12.75□□□□□ -0.37
DDR1-227ENST00000376570 VAV2P52735 878 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 RCAN1P53805 252 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 SETQ01105 290 aaPredicted RBP12.75□□□□□ -0.37
DDR1-227ENST00000376570 HP1BP3Q5SSJ5 553 aaPredicted RBP12.75□□□□□ -0.37
DDR1-227ENST00000376570 ALKBH5Q6P6C2 394 aaKnown RBP12.75□□□□□ -0.37
DDR1-227ENST00000376570 SLFN12Q8IYM2 578 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 MGARPQ8TDB4 240 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 GLG1Q92896 1179 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 PI4K2AQ9BTU6 479 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 TEKT3Q9BXF9 490 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 TMOD4Q9NZQ9 345 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 A0A087X0T9 212 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 HNRNPDLO14979 420 aaKnown RBP12.75□□□□□ -0.37
DDR1-227ENST00000376570 KIAA0754O94854 1291 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 FAM228BP0C875 321 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 CYP11B2P19099 503 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 SMAD1Q15797 465 aaKnown RBP12.75□□□□□ -0.37
DDR1-227ENST00000376570 CCDC93Q567U6 631 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 C4orf32Q8N8J7 132 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 CCDC114Q96M63 670 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 ARHGAP20Q9P2F6 1191 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 KDM3AQ9Y4C1 1321 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 KRIT1O00522 736 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 CSDE1O75534 798 aaKnown RBP12.74□□□□□ -0.37
DDR1-227ENST00000376570 AFPP02771 609 aaKnown RBP12.74□□□□□ -0.37
DDR1-227ENST00000376570 KLRC1P26715 233 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 CYP2C19P33261 490 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 TTC31Q49AM3 519 aaPredicted RBP12.74□□□□□ -0.37
DDR1-227ENST00000376570 TMEM139Q8IV31 216 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 DNAJC18Q9H819 358 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 MRPL11Q9Y3B7 192 aaKnown RBP12.74□□□□□ -0.37
DDR1-227ENST00000376570 CD58P19256 250 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 SCARA5Q6ZMJ2 495 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
DDR1-227ENST00000376570 SH3RF1Q7Z6J0 888 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 TTC16Q8NEE8 873 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 FNBP1Q96RU3 617 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 MTA3Q9BTC8 594 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 PARVGQ9HBI0 331 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 CAPN11Q9UMQ6 739 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 EGFRP00533 1210 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 SLC27A3Q5K4L6 730 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 STRIP1Q5VSL9 837 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 KAZNQ674X7 775 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 CIAPIN1Q6FI81 312 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 STXBP4Q6ZWJ1 553 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 SLC30A5Q8TAD4 765 aa12.74□□□□□ -0.37
DDR1-227ENST00000376570 PPANQ9NQ55 473 aaKnown RBP12.74□□□□□ -0.37
DDR1-227ENST00000376570 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.74□□□□□ -0.37
DDR1-227ENST00000376570 GOLGA6CA6NDK9 693 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 GOLGA6DP0CG33 693 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 BAG6P46379 1132 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 PADI6Q6TGC4 694 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 SH3BP5LQ7L8J4 393 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 TRIM58Q8NG06 486 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 OR2W6PQ8NHA6 318 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 RNF19AQ9NV58 838 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 GOLGA6AQ9NYA3 693 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 DMGDHQ9UI17 866 aaKnown RBP12.73□□□□□ -0.37
DDR1-227ENST00000376570 LCMT1Q9UIC8 334 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 MYO5AQ9Y4I1 1855 aaKnown RBP12.73□□□□□ -0.37
DDR1-227ENST00000376570 ZBED4O75132 1171 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 H2AFZP0C0S5 128 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 SRGAP2CP0DJJ0 459 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 NEFHP12036 1026 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 Q3C1V9 767 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 H2AFVQ71UI9 128 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 TICAM2Q86XR7 235 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 RIOX1Q9H6W3 641 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 DNAJC12Q9UKB3 198 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 PCNTO95613 3336 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 HIP1RO75146 1068 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 RNF40O75150 1001 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 CD19P15391 556 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
DDR1-227ENST00000376570 BAATQ14032 418 aaPredicted RBP12.73□□□□□ -0.37
DDR1-227ENST00000376570 RRP1BQ14684 758 aaKnown RBP12.73□□□□□ -0.37
DDR1-227ENST00000376570 WHAMMP3Q1A5X7 153 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 CEP85LQ5SZL2 805 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 SNRNP48Q6IEG0 339 aaKnown RBP12.73□□□□□ -0.37
DDR1-227ENST00000376570 DYDC1Q8WWB3 177 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 BTBD6Q96KE9 485 aa12.73□□□□□ -0.37
DDR1-227ENST00000376570 TBC1D8O95759 1140 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 CFAP221Q4G0U5 840 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 SWSAP1Q6NVH7 229 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 SCFD1Q8WVM8 642 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 ATG4CQ96DT6 458 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 TAAR1Q96RJ0 339 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 C7orf25Q9BPX7 421 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 H2AFXP16104 143 aaPredicted RBP12.72□□□□□ -0.37
DDR1-227ENST00000376570 TMOD1P28289 359 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 MYL7Q01449 175 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 MTMR1Q13613 665 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 KNOP1Q1ED39 458 aaKnown RBP12.72□□□□□ -0.37
DDR1-227ENST00000376570 DACT2Q5SW24 774 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 NBPF12Q5TAG4 269 aaPredicted RBP12.72□□□□□ -0.37
DDR1-227ENST00000376570 GUF1Q8N442 669 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms