RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 EPHB6O15197 1021 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 OPA1O60313 960 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 RNF40O75150 1001 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 IRX3P78415 501 aaPredicted RBP13.53□□□□□ -0.24
DDR1-224ENST00000376567 STRN3Q13033 797 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 TERF2Q15554 542 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 PPP1R18Q6NYC8 613 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 RUSC1Q9BVN2 902 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 PPANQ9NQ55 473 aaKnown RBP13.53□□□□□ -0.24
DDR1-224ENST00000376567 FHOD1Q9Y613 1164 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 CAPN6Q9Y6Q1 641 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 C5P01031 1676 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 MSH4O15457 936 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 LIG4P49917 911 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 SLC35G1Q2M3R5 365 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 CEP55Q53EZ4 464 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 TAOK3Q9H2K8 898 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 RIOX1Q9H6W3 641 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 BLOC1S4Q9NUP1 217 aa13.53□□□□□ -0.24
DDR1-224ENST00000376567 SERPING1P05155 500 aa13.52□□□□□ -0.24
DDR1-224ENST00000376567 CYP11B2P19099 503 aa13.52□□□□□ -0.24
DDR1-224ENST00000376567 CETN2P41208 172 aa13.52□□□□□ -0.24
DDR1-224ENST00000376567 POLGP54098 1239 aaPredicted RBP13.52□□□□□ -0.24
DDR1-224ENST00000376567 LRRC1Q9BTT6 524 aa13.52□□□□□ -0.24
DDR1-224ENST00000376567 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.24
DDR1-224ENST00000376567 METTL14Q9HCE5 456 aaKnown RBP13.52□□□□□ -0.24
DDR1-224ENST00000376567 PRM3Q9NNZ6 103 aa13.52□□□□□ -0.24
DDR1-224ENST00000376567 GPRC5CQ9NQ84 441 aa13.52□□□□□ -0.24
DDR1-224ENST00000376567 ASIC3Q9UHC3 531 aa13.52□□□□□ -0.24
DDR1-224ENST00000376567 COL1A1P02452 1464 aaPredicted RBP13.52□□□□□ -0.24
DDR1-224ENST00000376567 NDUFAB1O14561 156 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 SETQ01105 290 aaPredicted RBP13.52□□□□□ -0.25
DDR1-224ENST00000376567 PSMD2Q13200 908 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 AP3B2Q13367 1082 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 PDIA5Q14554 519 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 KRT71Q3SY84 523 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 DALRD3Q5D0E6 543 aaKnown RBP13.52□□□□□ -0.25
DDR1-224ENST00000376567 SNRNP48Q6IEG0 339 aaKnown RBP13.52□□□□□ -0.25
DDR1-224ENST00000376567 RNF207Q6ZRF8 634 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 SH3RF1Q7Z6J0 888 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 ZBTB33Q86T24 672 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 PACSIN1Q9BY11 444 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 DDX47Q9H0S4 455 aaKnown RBP13.52□□□□□ -0.25
DDR1-224ENST00000376567 PDS5AQ29RF7 1337 aaKnown RBP13.52□□□□□ -0.25
DDR1-224ENST00000376567 FAM86B1E9PN63 330 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 FAM86B2P0C5J1 330 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 ARP10275 920 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 DMTNQ08495 405 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 TRIP13Q15645 432 aaPredicted RBP13.52□□□□□ -0.25
DDR1-224ENST00000376567 DEPTORQ8TB45 409 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 MGARPQ8TDB4 240 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 ZKSCAN4Q969J2 545 aaPredicted RBP13.52□□□□□ -0.25
DDR1-224ENST00000376567 KMT5AQ9NQR1 393 aa13.52□□□□□ -0.25
DDR1-224ENST00000376567 DMP1Q13316 513 aaPredicted RBP13.51□□□□□ -0.25
DDR1-224ENST00000376567 KAZNQ674X7 775 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 USP37Q86T82 979 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 MICALL1Q8N3F8 863 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 TNFRSF25Q93038 417 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 PURBQ96QR8 312 aaKnown RBP13.51□□□□□ -0.25
DDR1-224ENST00000376567 OSBPL9Q96SU4 736 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 FGFBP2Q9BYJ0 223 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 WDR11Q9BZH6 1224 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 KCNK9Q9NPC2 374 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 ADAM21Q9UKJ8 722 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 STRCQ7RTU9 1775 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 HIP1RO75146 1068 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 IFNB1P01574 187 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 TMOD1P28289 359 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 SOX10P56693 466 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 TUBB2AQ13885 445 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 EPC2Q52LR7 807 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 SEL1L2Q5TEA6 688 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 NT5DC1Q5TFE4 455 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 PASD1Q8IV76 773 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 TUBB2BQ9BVA1 445 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 NUCKS1Q9H1E3 243 aaKnown RBP13.51□□□□□ -0.25
DDR1-224ENST00000376567 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 SRGAP2CP0DJJ0 459 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 CD58P19256 250 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 COPB2P35606 906 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 PRELPP51888 382 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 COG2Q14746 738 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 DRAP1Q14919 205 aaPredicted RBP13.51□□□□□ -0.25
DDR1-224ENST00000376567 ECM1Q16610 540 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 BCAS3Q9H6U6 928 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 L2HGDHQ9H9P8 463 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 PIM2Q9P1W9 311 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 NYAP2Q9P242 653 aa13.51□□□□□ -0.25
DDR1-224ENST00000376567 A0A1W2PQC6 194 aa13.5□□□□□ -0.25
DDR1-224ENST00000376567 KLRC1P26715 233 aa13.5□□□□□ -0.25
DDR1-224ENST00000376567 MXI1P50539 228 aa13.5□□□□□ -0.25
DDR1-224ENST00000376567 USP11P51784 963 aa13.5□□□□□ -0.25
DDR1-224ENST00000376567 CASP5P51878 434 aa13.5□□□□□ -0.25
DDR1-224ENST00000376567 PAK2Q13177 524 aa13.5□□□□□ -0.25
DDR1-224ENST00000376567 SWSAP1Q6NVH7 229 aa13.5□□□□□ -0.25
DDR1-224ENST00000376567 CCDC26Q8TAB7 109 aa13.5□□□□□ -0.25
DDR1-224ENST00000376567 RNF146Q9NTX7 359 aa13.5□□□□□ -0.25
DDR1-224ENST00000376567 FAM198AQ9UFP1 575 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms