RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SV2BQ7L1I2 683 aa25.6■■□□□ 1.69
HLA-C-202ENST00000376237 OTUD6AQ7L8S5 288 aa25.6■■□□□ 1.69
HLA-C-202ENST00000376237 KCNK18Q7Z418 384 aa25.6■■□□□ 1.69
HLA-C-202ENST00000376237 GLG1Q92896 1179 aa25.6■■□□□ 1.69
HLA-C-202ENST00000376237 UPF3AQ9H1J1 476 aaKnown RBP25.6■■□□□ 1.69
HLA-C-202ENST00000376237 TNMDQ9H2S6 317 aa25.6■■□□□ 1.69
HLA-C-202ENST00000376237 ANKEF1Q9NU02 776 aa25.6■■□□□ 1.69
HLA-C-202ENST00000376237 KBTBD4Q9NVX7 518 aa25.6■■□□□ 1.69
HLA-C-202ENST00000376237 DOCK5Q9H7D0 1870 aa25.6■■□□□ 1.69
HLA-C-202ENST00000376237 E9PMD0 336 aa25.59■■□□□ 1.69
HLA-C-202ENST00000376237 YWHABP31946 246 aaKnown RBP25.59■■□□□ 1.69
HLA-C-202ENST00000376237 XKR3Q5GH77 459 aa25.59■■□□□ 1.69
HLA-C-202ENST00000376237 CAVIN1Q6NZI2 390 aaKnown RBP25.59■■□□□ 1.69
HLA-C-202ENST00000376237 SH3TC2Q8TF17 1288 aa25.59■■□□□ 1.69
HLA-C-202ENST00000376237 LENG1Q96BZ8 264 aaPredicted RBP25.59■■□□□ 1.69
HLA-C-202ENST00000376237 DBR1Q9UK59 544 aaKnown RBP25.59■■□□□ 1.69
HLA-C-202ENST00000376237 ZNF862O60290 1169 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 KPNA6O60684 536 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 MYL1P05976 194 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 PLA2G4BP0C869 781 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 PSMC6P62333 389 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 UTP14CQ5TAP6 766 aaKnown RBP25.58■■□□□ 1.69
HLA-C-202ENST00000376237 SH3RF1Q7Z6J0 888 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 SYT2Q8N9I0 419 aaPredicted RBP25.58■■□□□ 1.69
HLA-C-202ENST00000376237 PIGOQ8TEQ8 1089 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 LRRC15Q8TF66 581 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 PAGE5Q96GU1 130 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 FAM167AQ96KS9 214 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 XPNPEP3Q9NQH7 507 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 ERAP1Q9NZ08 941 aa25.58■■□□□ 1.69
HLA-C-202ENST00000376237 LGALS2P05162 132 aa25.58■■□□□ 1.68
HLA-C-202ENST00000376237 PRKCEQ02156 737 aa25.58■■□□□ 1.68
HLA-C-202ENST00000376237 FSCN1Q16658 493 aaKnown RBP25.58■■□□□ 1.68
HLA-C-202ENST00000376237 CKAP2LQ8IYA6 745 aa25.58■■□□□ 1.68
HLA-C-202ENST00000376237 BHMT2Q9H2M3 363 aa25.58■■□□□ 1.68
HLA-C-202ENST00000376237 NRBP2Q9NSY0 501 aa25.58■■□□□ 1.68
HLA-C-202ENST00000376237 TMEM63CQ9P1W3 806 aa25.58■■□□□ 1.68
HLA-C-202ENST00000376237 ZNF215Q9UL58 517 aaPredicted RBP25.58■■□□□ 1.68
HLA-C-202ENST00000376237 SYNRGQ9UMZ2 1314 aa25.57■■□□□ 1.68
HLA-C-202ENST00000376237 ZEB2O60315 1214 aa25.57■■□□□ 1.68
HLA-C-202ENST00000376237 C6orf222P0C671 652 aaPredicted RBP25.57■■□□□ 1.68
HLA-C-202ENST00000376237 LETM1O95202 739 aaPredicted RBP25.56■■□□□ 1.68
HLA-C-202ENST00000376237 OATP04181 439 aa25.56■■□□□ 1.68
HLA-C-202ENST00000376237 SLC12A3P55017 1021 aa25.56■■□□□ 1.68
HLA-C-202ENST00000376237 MCM6Q14566 821 aa25.56■■□□□ 1.68
HLA-C-202ENST00000376237 POSTNQ15063 836 aa25.56■■□□□ 1.68
HLA-C-202ENST00000376237 CAMK4Q16566 473 aa25.56■■□□□ 1.68
HLA-C-202ENST00000376237 C16orf70Q9BSU1 422 aa25.56■■□□□ 1.68
HLA-C-202ENST00000376237 BMP2KQ9NSY1 1161 aaPredicted RBP25.56■■□□□ 1.68
HLA-C-202ENST00000376237 KCND2Q9NZV8 630 aa25.56■■□□□ 1.68
HLA-C-202ENST00000376237 STBD1O95210 358 aa25.55■■□□□ 1.68
HLA-C-202ENST00000376237 ATP4AP20648 1035 aa25.55■■□□□ 1.68
HLA-C-202ENST00000376237 AFMP43652 599 aa25.55■■□□□ 1.68
HLA-C-202ENST00000376237 MDM2Q00987 491 aaPredicted RBP25.55■■□□□ 1.68
HLA-C-202ENST00000376237 GNASQ5JWF2 1037 aa25.55■■□□□ 1.68
HLA-C-202ENST00000376237 ANO5Q75V66 913 aa25.55■■□□□ 1.68
HLA-C-202ENST00000376237 BBXQ8WY36 941 aaPredicted RBP25.55■■□□□ 1.68
HLA-C-202ENST00000376237 CCDC43Q96MW1 224 aaKnown RBP25.55■■□□□ 1.68
HLA-C-202ENST00000376237 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.55■■□□□ 1.68
HLA-C-202ENST00000376237 PRDM10Q9NQV6 1147 aa25.55■■□□□ 1.68
HLA-C-202ENST00000376237 ARHGEF35A5YM69 484 aa25.54■■□□□ 1.68
HLA-C-202ENST00000376237 H3BRB1 525 aa25.54■■□□□ 1.68
HLA-C-202ENST00000376237 ZBTB39O15060 712 aa25.54■■□□□ 1.68
HLA-C-202ENST00000376237 ADAMTS4O75173 837 aa25.54■■□□□ 1.68
HLA-C-202ENST00000376237 SSBP05455 408 aaKnown RBP eCLIP25.54■■□□□ 1.68
HLA-C-202ENST00000376237 CST5P28325 142 aaPredicted RBP25.54■■□□□ 1.68
HLA-C-202ENST00000376237 RARRES1P49788 294 aa25.54■■□□□ 1.68
HLA-C-202ENST00000376237 TRIM50Q86XT4 487 aa25.54■■□□□ 1.68
HLA-C-202ENST00000376237 ATP8B4Q8TF62 1192 aa25.54■■□□□ 1.68
HLA-C-202ENST00000376237 MTRQ99707 1265 aa25.54■■□□□ 1.68
HLA-C-202ENST00000376237 NIFKQ9BYG3 293 aaKnown RBP25.54■■□□□ 1.68
HLA-C-202ENST00000376237 TUT1Q9H6E5 874 aaKnown RBP25.54■■□□□ 1.68
HLA-C-202ENST00000376237 PPME1Q9Y570 386 aa25.54■■□□□ 1.68
HLA-C-202ENST00000376237 A0A087WWV3 80 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 GTPBP6O43824 516 aaPredicted RBP25.53■■□□□ 1.68
HLA-C-202ENST00000376237 PGK1P00558 417 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 DHX8Q14562 1220 aaKnown RBP25.53■■□□□ 1.68
HLA-C-202ENST00000376237 RNF180Q86T96 592 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 KLHDC9Q8NEP7 349 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 C7orf25Q9BPX7 421 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 SEPT9Q9UHD8 586 aaPredicted RBP25.53■■□□□ 1.68
HLA-C-202ENST00000376237 HBP1O60381 514 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 F2P00734 622 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 BEX3Q00994 111 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 PLCB4Q15147 1175 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 XKR9Q5GH70 373 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 LHX8Q68G74 356 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 CNNM4Q6P4Q7 775 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 PCSK9Q8NBP7 692 aaKnown RBP25.53■■□□□ 1.68
HLA-C-202ENST00000376237 STAMQ92783 540 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 CEP170P1Q96L14 293 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 ANP32EQ9BTT0 268 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 KATNAL1Q9BW62 490 aa25.53■■□□□ 1.68
HLA-C-202ENST00000376237 ZNF286BP0CG31 522 aa25.52■■□□□ 1.68
HLA-C-202ENST00000376237 RBM43Q6ZSC3 357 aaKnown RBP25.52■■□□□ 1.68
HLA-C-202ENST00000376237 TRMT1LQ7Z2T5 733 aaKnown RBP25.52■■□□□ 1.68
HLA-C-202ENST00000376237 GPBP1Q86WP2 473 aa25.52■■□□□ 1.68
HLA-C-202ENST00000376237 TRIM9Q9C026 710 aa25.52■■□□□ 1.68
HLA-C-202ENST00000376237 PAK6Q9NQU5 681 aaPredicted RBP25.52■■□□□ 1.68
HLA-C-202ENST00000376237 CYP26B1Q9NR63 512 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms