RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 TMEM63BQ5T3F8 832 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 OLFML2BQ68BL8 750 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 ISM2Q6H9L7 571 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 MIS18BP1Q6P0N0 1132 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 ABHD15Q6UXT9 468 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 GPBP1Q86WP2 473 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 CCDC60Q8IWA6 550 aaPredicted RBP11.67□□□□□ -0.54
PDPN-203ENST00000376061 SYT2Q8N9I0 419 aaPredicted RBP11.67□□□□□ -0.54
PDPN-203ENST00000376061 PIGOQ8TEQ8 1089 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 COPS5Q92905 334 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 NACC1Q96RE7 527 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 LRRC27Q9C0I9 530 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 BHMT2Q9H2M3 363 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 ABHD16BQ9H3Z7 469 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 TRPC6Q9Y210 931 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 IGKV6D-21A0A0A0MT36 114 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 GSTTP1A0A1W2PQM5 241 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 ZBTB39O15060 712 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 ZNF862O60290 1169 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 ATG7O95352 703 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 PTGS1P23219 599 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 ADCYAP1R1P41586 468 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 SP3Q02447 781 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 ARHGAP1Q07960 439 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 ACVR2BQ13705 512 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 KCNB1Q14721 858 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 KMT5BQ4FZB7 885 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 ARSHQ5FYA8 562 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 DYMQ7RTS9 669 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 C4orf19Q8IY42 314 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 RNF214Q8ND24 703 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 FAM200AQ8TCP9 573 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 DDX12PQ92771 950 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 DNAJC19Q96DA6 116 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 RUSC1Q9BVN2 902 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 RMND1Q9NWS8 449 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 ZHX1Q9UKY1 873 aaPredicted RBP11.66□□□□□ -0.54
PDPN-203ENST00000376061 GABRQQ9UN88 632 aa11.66□□□□□ -0.54
PDPN-203ENST00000376061 PCNTO95613 3336 aa11.65□□□□□ -0.54
PDPN-203ENST00000376061 NPHP3-ACAD11A0A0J9YXS1 232 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.65□□□□□ -0.55
PDPN-203ENST00000376061 BACH1O14867 736 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 RHOBTB3O94955 611 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 STBD1O95210 358 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 CAVIN2O95810 425 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 XRCC5P13010 732 aaKnown RBP11.65□□□□□ -0.55
PDPN-203ENST00000376061 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.55
PDPN-203ENST00000376061 CYP2C19P33261 490 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 ZNF165P49910 485 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 PRKCEQ02156 737 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 PRKCZQ05513 592 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 IRF5Q13568 498 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 GJC2Q5T442 439 aaPredicted RBP11.65□□□□□ -0.55
PDPN-203ENST00000376061 SWSAP1Q6NVH7 229 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 UNC13DQ70J99 1090 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 DHX37Q8IY37 1157 aaKnown RBP11.65□□□□□ -0.55
PDPN-203ENST00000376061 ATP6V0A1Q93050 837 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 GPR20Q99678 358 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 MLXIPQ9HAP2 919 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 GRPEL1Q9HAV7 217 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 CBX8Q9HC52 389 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 EXOC1Q9NV70 894 aa11.65□□□□□ -0.55
PDPN-203ENST00000376061 DBR1Q9UK59 544 aaKnown RBP11.65□□□□□ -0.55
PDPN-203ENST00000376061 PVALEFA0A1B0GWK0 134 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 ARHGEF35A5YM69 484 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 TMEM150BA6NC51 233 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 NOP56O00567 594 aaKnown RBP11.64□□□□□ -0.55
PDPN-203ENST00000376061 ADCY6O43306 1168 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 DKC1O60832 514 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDPN-203ENST00000376061 GH1P01241 217 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 ZNF865P0CJ78 1059 aaPredicted RBP11.64□□□□□ -0.55
PDPN-203ENST00000376061 TCF7P36402 384 aaPredicted RBP11.64□□□□□ -0.55
PDPN-203ENST00000376061 FLT3LGP49771 235 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 RARRES1P49788 294 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 EHHADHQ08426 723 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 KIF22Q14807 665 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 CCDC144BQ3MJ40 725 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 HSDL1Q3SXM5 330 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 PRAMEF19Q5SWL8 479 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 PLA2G4FQ68DD2 849 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 RINT1Q6NUQ1 792 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 SMYD4Q8IYR2 804 aaPredicted RBP11.64□□□□□ -0.55
PDPN-203ENST00000376061 MLKLQ8NB16 471 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 CD99L2Q8TCZ2 262 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 CCDC47Q96A33 483 aaKnown RBP11.64□□□□□ -0.55
PDPN-203ENST00000376061 EMID1Q96A84 441 aaPredicted RBP11.64□□□□□ -0.55
PDPN-203ENST00000376061 SPATA33Q96N06 139 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 PCYT2Q99447 389 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 REEP2Q9BRK0 252 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 ZNF302Q9NR11 478 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 SAGE1Q9NXZ1 904 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 EMSYQ7Z589 1322 aa11.64□□□□□ -0.55
PDPN-203ENST00000376061 FRMD3A2A2Y4 597 aa11.63□□□□□ -0.55
PDPN-203ENST00000376061 GPR25O00155 361 aa11.63□□□□□ -0.55
PDPN-203ENST00000376061 LGR5O75473 907 aa11.63□□□□□ -0.55
PDPN-203ENST00000376061 KRT18P05783 430 aaKnown RBP11.63□□□□□ -0.55
PDPN-203ENST00000376061 XRCC6P12956 609 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDPN-203ENST00000376061 IDEP14735 1019 aa11.63□□□□□ -0.55
PDPN-203ENST00000376061 HSPA6P17066 643 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms