RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 GJA10Q969M2 543 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 IL23AQ9NPF7 189 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 PCDH10Q9P2E7 1040 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 GABBR1Q9UBS5 961 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 TUBE1Q9UJT0 475 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 VAV3Q9UKW4 847 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 TET1Q8NFU7 2136 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 MBLAC1A4D2B0 266 aaPredicted RBP13.45□□□□□ -0.26
CLIC1-207ENST00000375780 IQCF3P0C7M6 154 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 CKBP12277 381 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 SELPP16109 830 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 ATP2B1P20020 1258 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 MCM7P33993 719 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 TRIM71Q2Q1W2 868 aaKnown RBP13.45□□□□□ -0.26
CLIC1-207ENST00000375780 HABP4Q5JVS0 413 aaKnown RBP13.45□□□□□ -0.26
CLIC1-207ENST00000375780 TTC38Q5R3I4 469 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 LRRC8DQ7L1W4 858 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 BBXQ8WY36 941 aaPredicted RBP13.45□□□□□ -0.26
CLIC1-207ENST00000375780 CEP131Q9UPN4 1083 aa13.45□□□□□ -0.26
CLIC1-207ENST00000375780 WNT7AO00755 349 aa13.44□□□□□ -0.26
CLIC1-207ENST00000375780 DKC1O60832 514 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■■□□□ 12.2
CLIC1-207ENST00000375780 ZNF484Q5JVG2 852 aa13.44□□□□□ -0.26
CLIC1-207ENST00000375780 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
CLIC1-207ENST00000375780 RSPH3Q86UC2 560 aa13.44□□□□□ -0.26
CLIC1-207ENST00000375780 SCLYQ96I15 445 aa13.44□□□□□ -0.26
CLIC1-207ENST00000375780 PCDHA12Q9UN75 941 aa13.44□□□□□ -0.26
CLIC1-207ENST00000375780 OATP04181 439 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 ATP4AP20648 1035 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 THPOP40225 353 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 IGBP1P78318 339 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 PRKCEQ02156 737 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 PKP1Q13835 747 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 RILPL1Q5EBL4 403 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 WNT8BQ93098 351 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 MTMR9Q96QG7 549 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 MTIF3Q9H2K0 278 aaKnown RBP13.43□□□□□ -0.26
CLIC1-207ENST00000375780 TTC12Q9H892 705 aaPredicted RBP13.43□□□□□ -0.26
CLIC1-207ENST00000375780 NRBP2Q9NSY0 501 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 LOXHD1Q8IVV2 1947 aa13.43□□□□□ -0.26
CLIC1-207ENST00000375780 ZNF862O60290 1169 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 OR52Z1P0C646 297 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 MCM4P33991 863 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 EPHB4P54760 987 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 PSMC5P62195 406 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 SPIRE1Q08AE8 756 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 EPHA7Q15375 998 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 MARCH8Q5T0T0 291 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 ZNF618Q5T7W0 954 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 NCAPH2Q6IBW4 605 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.42□□□□□ -0.261e-8■■□□□ 13.2
CLIC1-207ENST00000375780 PCDHA2Q9Y5H9 948 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 SIP14410 1827 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 ARID2Q68CP9 1835 aa13.42□□□□□ -0.26
CLIC1-207ENST00000375780 SMIM35A0A1B0GVV1 85 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
CLIC1-207ENST00000375780 RSPH10B2B2RC85 870 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 EML1O00423 815 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 LAD1O00515 517 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 P4HBP07237 508 aaKnown RBP13.41□□□□□ -0.26
CLIC1-207ENST00000375780 RSPH10BP0C881 870 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 ACTN1P12814 892 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 TXKP42681 527 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 QARSP47897 775 aaKnown RBP13.41□□□□□ -0.26
CLIC1-207ENST00000375780 SHHQ15465 462 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 ZNF174Q15697 407 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 UGCGQ16739 394 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 LRIT3Q3SXY7 679 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 XKR3Q5GH77 459 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 TMEM240Q5SV17 173 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 C9orf50Q5SZB4 431 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 BRAPQ7Z569 592 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 NEK9Q8TD19 979 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 RNPC3Q96LT9 517 aaKnown RBP13.41□□□□□ -0.26
CLIC1-207ENST00000375780 TMEM60Q9H2L4 133 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 MAGEB2O15479 319 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 FGBP02675 491 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 ACRP10323 421 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 TOB1P50616 345 aaPredicted RBP13.41□□□□□ -0.26
CLIC1-207ENST00000375780 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 TRAF7Q6Q0C0 670 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 MTHFD1LQ6UB35 978 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 RUFY4Q6ZNE9 571 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 ZNF365Q70YC5 407 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 C16orf59Q7L2K0 433 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 DEFB128Q7Z7B8 93 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 BANK1Q8NDB2 785 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 TRAPPC12Q8WVT3 735 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 MICAL3Q7RTP6 2002 aa13.41□□□□□ -0.26
CLIC1-207ENST00000375780 ZBTB42B2RXF5 422 aa13.4□□□□□ -0.26
CLIC1-207ENST00000375780 CXCL10P02778 98 aa13.4□□□□□ -0.26
CLIC1-207ENST00000375780 PDIA4P13667 645 aaKnown RBP13.4□□□□□ -0.26
CLIC1-207ENST00000375780 SYT1P21579 422 aa13.4□□□□□ -0.26
CLIC1-207ENST00000375780 KLRC1P26715 233 aa13.4□□□□□ -0.26
CLIC1-207ENST00000375780 FAM26DQ5JW98 314 aa13.4□□□□□ -0.26
CLIC1-207ENST00000375780 TRMT1LQ7Z2T5 733 aaKnown RBP13.4□□□□□ -0.26
CLIC1-207ENST00000375780 C4orf19Q8IY42 314 aa13.4□□□□□ -0.26
CLIC1-207ENST00000375780 NME8Q8N427 588 aa13.4□□□□□ -0.26
CLIC1-207ENST00000375780 DNAJB3Q8WWF6 145 aa13.4□□□□□ -0.26
CLIC1-207ENST00000375780 HERVK_113Q902F9 699 aa13.4□□□□□ -0.26
CLIC1-207ENST00000375780 LXNQ9BS40 222 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms