RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 CERKLQ49MI3 558 aaPredicted RBP16.63■□□□□ 0.25
MSH5-203ENST00000375750 CHADLQ6NUI6 762 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 RNF10Q8N5U6 811 aaKnown RBP16.63■□□□□ 0.25
MSH5-203ENST00000375750 ZNF473Q8WTR7 871 aaKnown RBP16.63■□□□□ 0.25
MSH5-203ENST00000375750 HAS1Q92839 578 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 STK17AQ9UEE5 414 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 RBAK-RBAKDNI3L0D1 243 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 FGFR1OPO95684 399 aaKnown RBP16.63■□□□□ 0.25
MSH5-203ENST00000375750 SLC9A1P19634 815 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 SLC16A2P36021 539 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 FXR2P51116 673 aaKnown RBP eCLIP16.63■□□□□ 0.25
MSH5-203ENST00000375750 MNAT1P51948 309 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 FKBP3Q00688 224 aaKnown RBP16.63■□□□□ 0.25
MSH5-203ENST00000375750 SF3A3Q12874 501 aaKnown RBP eCLIP16.63■□□□□ 0.252e-6■■■□□ 19.1
MSH5-203ENST00000375750 CDC37Q16543 378 aaPredicted RBP16.63■□□□□ 0.25
MSH5-203ENST00000375750 TMEM266Q2M3C6 531 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 DALRD3Q5D0E6 543 aaKnown RBP16.63■□□□□ 0.25
MSH5-203ENST00000375750 FAM26FQ5R3K3 315 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 TTBK2Q6IQ55 1244 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 KDM7AQ6ZMT4 941 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 OTUD6BQ8N6M0 293 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 GMLQ99445 158 aa16.63■□□□□ 0.25
MSH5-203ENST00000375750 BCCIPQ9P287 314 aaKnown RBP eCLIP16.63■□□□□ 0.25
MSH5-203ENST00000375750 RAD21O60216 631 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 TMOD1P28289 359 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 ADCY7P51828 1080 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 PTGISQ16647 500 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 USP38Q8NB14 1042 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.62■□□□□ 0.25
MSH5-203ENST00000375750 E7EVH7 732 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 CEP104O60308 925 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 MARCH6O60337 910 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 PPP1R11O60927 126 aaPredicted RBP16.62■□□□□ 0.25
MSH5-203ENST00000375750 GDF11O95390 407 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 STAT3P40763 770 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 FNTAP49354 379 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 PTK2Q05397 1052 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 SLC18A3Q16572 532 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 TMEM119Q4V9L6 283 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 GLE1Q53GS7 698 aaKnown RBP16.62■□□□□ 0.25
MSH5-203ENST00000375750 NIM1KQ8IY84 436 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 GPATCH11Q8N954 259 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 ATP6V1G3Q96LB4 118 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 CCT8L2Q96SF2 557 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 EPN3Q9H201 632 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 ZNRF3Q9ULT6 936 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 KIAA1024Q9UPX6 916 aa16.62■□□□□ 0.25
MSH5-203ENST00000375750 SPDYE2BA6NHP3 402 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 SPDYE6P0CI01 402 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 ITGA4P13612 1032 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 IBSPP21815 317 aaPredicted RBP16.61■□□□□ 0.25
MSH5-203ENST00000375750 ECHS1P30084 290 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 CASP5P51878 434 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 IFT88Q13099 833 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 UAP1Q16222 522 aaPredicted RBP16.61■□□□□ 0.25
MSH5-203ENST00000375750 ZNF571Q7Z3V5 609 aaPredicted RBP16.61■□□□□ 0.25
MSH5-203ENST00000375750 OGFOD1Q8N543 542 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 IQCDQ96DY2 449 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 DDX47Q9H0S4 455 aaKnown RBP16.61■□□□□ 0.25
MSH5-203ENST00000375750 MYO3BQ8WXR4 1341 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 POTEB3A0JP26 581 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 POTECB2RU33 542 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 H0YHG0 523 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 PPP1R37O75864 691 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 HSD17B3P37058 310 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 IRX3P78415 501 aaPredicted RBP16.61■□□□□ 0.25
MSH5-203ENST00000375750 DLGAP5Q15398 846 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 HERC4Q5GLZ8 1057 aaPredicted RBP16.61■□□□□ 0.25
MSH5-203ENST00000375750 MCTP2Q6DN12 878 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 POTEBQ6S5H4 581 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 NLRP14Q86W24 1093 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 RUBCNQ92622 972 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 AJAP1Q9UKB5 411 aaPredicted RBP16.61■□□□□ 0.25
MSH5-203ENST00000375750 PCDHGC5Q9Y5F6 944 aa16.61■□□□□ 0.25
MSH5-203ENST00000375750 DCDC2CA8MYV0 355 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 MEFVO15553 781 aaPredicted RBP16.6■□□□□ 0.25
MSH5-203ENST00000375750 SNHG28P0DPA3 235 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 MDH1P40925 334 aaKnown RBP16.6■□□□□ 0.25
MSH5-203ENST00000375750 CXCL9Q07325 125 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 ITGB3BPQ13352 177 aaPredicted RBP16.6■□□□□ 0.25
MSH5-203ENST00000375750 ASIC2Q16515 512 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 SPRED3Q2MJR0 410 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 GJB7Q6PEY0 223 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 KCTD1Q719H9 257 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 MYCBPAPQ8TBZ2 947 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 SCFD1Q8WVM8 642 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 CCDC17Q96LX7 622 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 CSRNP1Q96S65 589 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 LOC102724159A0A0B4J2E5 919 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 KIAA0754O94854 1291 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 EEF2P13639 858 aaKnown RBP16.6■□□□□ 0.25
MSH5-203ENST00000375750 JAG1P78504 1218 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 SEPT2Q15019 361 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 PWP2Q15269 919 aaKnown RBP16.6■□□□□ 0.25
MSH5-203ENST00000375750 TATDN1Q6P1N9 297 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 TRIM59Q8IWR1 403 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 SUGP1Q8IWZ8 645 aaKnown RBP16.6■□□□□ 0.25
MSH5-203ENST00000375750 IKZF4Q9H2S9 585 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 RIOX1Q9H6W3 641 aa16.6■□□□□ 0.25
MSH5-203ENST00000375750 RIC8AQ9NPQ8 531 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms