RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 WEE2P0C1S8 567 aa20.26■□□□□ 0.83
H2AFX-201ENST00000375167 SNHG28P0DPA3 235 aa20.26■□□□□ 0.83
H2AFX-201ENST00000375167 DMWDQ09019 674 aa20.26■□□□□ 0.83
H2AFX-201ENST00000375167 TBC1D8BQ0IIM8 1120 aa20.26■□□□□ 0.83
H2AFX-201ENST00000375167 ATAT1Q5SQI0 421 aa20.26■□□□□ 0.83
H2AFX-201ENST00000375167 RARS2Q5T160 578 aaKnown RBP20.26■□□□□ 0.83
H2AFX-201ENST00000375167 XRRA1Q6P2D8 792 aa20.26■□□□□ 0.83
H2AFX-201ENST00000375167 DDX19BQ9UMR2 479 aa20.26■□□□□ 0.83
H2AFX-201ENST00000375167 ANKRD11Q6UB99 2663 aaPredicted RBP20.26■□□□□ 0.83
H2AFX-201ENST00000375167 TBKBP1A7MCY6 615 aa20.25■□□□□ 0.83
H2AFX-201ENST00000375167 RPLP2P05387 115 aaKnown RBP20.25■□□□□ 0.83
H2AFX-201ENST00000375167 LAG3P18627 525 aa20.25■□□□□ 0.83
H2AFX-201ENST00000375167 MRPS6P82932 125 aaKnown RBP20.25■□□□□ 0.83
H2AFX-201ENST00000375167 VARS2Q5ST30 1063 aaKnown RBP20.25■□□□□ 0.83
H2AFX-201ENST00000375167 DNAJB3Q8WWF6 145 aa20.25■□□□□ 0.83
H2AFX-201ENST00000375167 SECISBP2LQ93073 1101 aaKnown RBP20.25■□□□□ 0.83
H2AFX-201ENST00000375167 ECHDC1Q9NTX5 307 aa20.25■□□□□ 0.83
H2AFX-201ENST00000375167 TUBE1Q9UJT0 475 aa20.25■□□□□ 0.83
H2AFX-201ENST00000375167 PCDHB7Q9Y5E2 793 aa20.25■□□□□ 0.83
H2AFX-201ENST00000375167 SQORQ9Y6N5 450 aa20.25■□□□□ 0.83
H2AFX-201ENST00000375167 FASNP49327 2511 aaKnown RBP20.25■□□□□ 0.83
H2AFX-201ENST00000375167 DOCK5Q9H7D0 1870 aa20.25■□□□□ 0.83
H2AFX-201ENST00000375167 LOXHD1Q8IVV2 1947 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 GOLGA8HP0CJ92 632 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 CCND2P30279 289 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 PLCB3Q01970 1234 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 PAK2Q13177 524 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 PGM5Q15124 567 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 UTP14CQ5TAP6 766 aaKnown RBP20.24■□□□□ 0.83
H2AFX-201ENST00000375167 METTL7BQ6UX53 244 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 VSIG10LQ86VR7 867 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 GPKOWQ92917 476 aaPredicted RBP eCLIP20.24■□□□□ 0.83
H2AFX-201ENST00000375167 GPR20Q99678 358 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 UBA5Q9GZZ9 404 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 CPVLQ9H3G5 476 aa20.24■□□□□ 0.83
H2AFX-201ENST00000375167 CHMP4BQ9H444 224 aaKnown RBP20.24■□□□□ 0.83
H2AFX-201ENST00000375167 SARSP49591 514 aaKnown RBP20.23■□□□□ 0.83
H2AFX-201ENST00000375167 HSD17B4P51659 736 aa20.23■□□□□ 0.83
H2AFX-201ENST00000375167 PPFIA1Q13136 1202 aa20.23■□□□□ 0.83
H2AFX-201ENST00000375167 NEDD9Q14511 834 aa20.23■□□□□ 0.83
H2AFX-201ENST00000375167 RRP12Q5JTH9 1297 aaKnown RBP20.23■□□□□ 0.83
H2AFX-201ENST00000375167 C20orf194Q5TEA3 1177 aa20.23■□□□□ 0.83
H2AFX-201ENST00000375167 TMC7Q7Z402 723 aa20.23■□□□□ 0.83
H2AFX-201ENST00000375167 SEC62Q99442 399 aaKnown RBP20.23■□□□□ 0.83
H2AFX-201ENST00000375167 SH2B1Q9NRF2 756 aaPredicted RBP20.23■□□□□ 0.83
H2AFX-201ENST00000375167 TCP11L1Q9NUJ3 509 aa20.23■□□□□ 0.83
H2AFX-201ENST00000375167 DZANK1Q9NVP4 752 aa20.23■□□□□ 0.83
H2AFX-201ENST00000375167 ANAPC4Q9UJX5 808 aa20.23■□□□□ 0.83
H2AFX-201ENST00000375167 PADI3Q9ULW8 664 aa20.23■□□□□ 0.83
H2AFX-201ENST00000375167 M0QZ92 97 aa20.22■□□□□ 0.83
H2AFX-201ENST00000375167 SPECC1Q5M775 1068 aa20.22■□□□□ 0.83
H2AFX-201ENST00000375167 IER5Q5VY09 327 aa20.22■□□□□ 0.83
H2AFX-201ENST00000375167 OTOP3Q7RTS5 596 aa20.22■□□□□ 0.83
H2AFX-201ENST00000375167 C1orf210Q8IVY1 113 aa20.22■□□□□ 0.83
H2AFX-201ENST00000375167 IL31RAQ8NI17 732 aa20.22■□□□□ 0.83
H2AFX-201ENST00000375167 BCAS3Q9H6U6 928 aa20.22■□□□□ 0.83
H2AFX-201ENST00000375167 TYW1Q9NV66 732 aaKnown RBP20.22■□□□□ 0.83
H2AFX-201ENST00000375167 HCSTQ9UBK5 93 aa20.22■□□□□ 0.83
H2AFX-201ENST00000375167 WNT16Q9UBV4 365 aa20.22■□□□□ 0.83
H2AFX-201ENST00000375167 SMC1AQ14683 1233 aaKnown RBP20.21■□□□□ 0.83
H2AFX-201ENST00000375167 QRICH1Q2TAL8 776 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 GNPTABQ3T906 1256 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 STOX1Q6ZVD7 989 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 CYFIP1Q7L576 1253 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 BORCS6Q96GS4 357 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 TBC1D17Q9HA65 648 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 KCNK12Q9HB15 430 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 ZBTB40Q9NUA8 1239 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 SPTLC1O15269 473 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 CFHP08603 1231 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 PPM1AP35813 382 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 KRT17Q04695 432 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 GRIK4Q16099 956 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 ADGRF4Q8IZF3 695 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 C12orf76Q8N812 135 aaPredicted RBP20.21■□□□□ 0.83
H2AFX-201ENST00000375167 GPATCH3Q96I76 525 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 ZFP91Q96JP5 570 aaPredicted RBP20.21■□□□□ 0.83
H2AFX-201ENST00000375167 TTC14Q96N46 770 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 FAM49AQ9H0Q0 323 aaPredicted RBP20.21■□□□□ 0.83
H2AFX-201ENST00000375167 TRPV2Q9Y5S1 764 aa20.21■□□□□ 0.83
H2AFX-201ENST00000375167 MBLAC1A4D2B0 266 aaPredicted RBP20.2■□□□□ 0.82
H2AFX-201ENST00000375167 KRBA1A5PL33 1030 aa20.2■□□□□ 0.82
H2AFX-201ENST00000375167 DHX16O60231 1041 aaKnown RBP20.2■□□□□ 0.82
H2AFX-201ENST00000375167 GHRHRQ02643 423 aa20.2■□□□□ 0.82
H2AFX-201ENST00000375167 PPM1JQ5JR12 505 aa20.2■□□□□ 0.82
H2AFX-201ENST00000375167 CCDC149Q6ZUS6 474 aa20.2■□□□□ 0.82
H2AFX-201ENST00000375167 LRRCC1Q9C099 1032 aa20.2■□□□□ 0.82
H2AFX-201ENST00000375167 MAP3K20Q9NYL2 800 aaKnown RBP20.2■□□□□ 0.82
H2AFX-201ENST00000375167 IGSF9Q9P2J2 1179 aa20.2■□□□□ 0.82
H2AFX-201ENST00000375167 USP18Q9UMW8 372 aa20.2■□□□□ 0.82
H2AFX-201ENST00000375167 IGSF9BQ9UPX0 1349 aa20.19■□□□□ 0.82
H2AFX-201ENST00000375167 CACNA1IQ9P0X4 2223 aa20.19■□□□□ 0.82
H2AFX-201ENST00000375167 CLASP2O75122 1294 aaKnown RBP20.19■□□□□ 0.82
H2AFX-201ENST00000375167 DCNP07585 359 aaKnown RBP20.19■□□□□ 0.82
H2AFX-201ENST00000375167 FGRP09769 529 aa20.19■□□□□ 0.82
H2AFX-201ENST00000375167 CA8P35219 290 aa20.19■□□□□ 0.82
H2AFX-201ENST00000375167 SP4Q02446 784 aa20.19■□□□□ 0.82
H2AFX-201ENST00000375167 COL9A3Q14050 684 aaPredicted RBP20.19■□□□□ 0.82
H2AFX-201ENST00000375167 CWH43Q9H720 699 aa20.19■□□□□ 0.82
H2AFX-201ENST00000375167 CA14Q9ULX7 337 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms