RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 REXO1Q8N1G1 1221 aaKnown RBP12.15□□□□□ -0.47
CCDC40-203ENST00000374877 CYFIP2Q96F07 1278 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 CCDC114Q96M63 670 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 MXD3Q9BW11 206 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 EDEM3Q9BZQ6 932 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 TMBIM4Q9HC24 238 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 DDX60LQ5H9U9 1706 aaKnown RBP12.15□□□□□ -0.47
CCDC40-203ENST00000374877 NOL4O94818 638 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 HSPA9P38646 679 aaKnown RBP12.14□□□□□ -0.47
CCDC40-203ENST00000374877 EPS15P42566 896 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 ACTN3Q08043 901 aaPredicted RBP12.14□□□□□ -0.47
CCDC40-203ENST00000374877 UBLCP1Q8WVY7 318 aaPredicted RBP12.14□□□□□ -0.47
CCDC40-203ENST00000374877 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 AP1M1Q9BXS5 423 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 NUCKS1Q9H1E3 243 aaKnown RBP12.14□□□□□ -0.47
CCDC40-203ENST00000374877 KLC4Q9NSK0 619 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 SAP30BPQ9UHR5 308 aaKnown RBP12.14□□□□□ -0.47
CCDC40-203ENST00000374877 COL4A5P29400 1685 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 ARFGEF1Q9Y6D6 1849 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 GOLGA6L7A0A1B0GV03 622 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 NFKBIEO00221 500 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 ATP2C2O75185 946 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 TMOD1P28289 359 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 FKBP3Q00688 224 aaKnown RBP12.14□□□□□ -0.47
CCDC40-203ENST00000374877 KCNK18Q7Z418 384 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 BCS1LQ9Y276 419 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 PCDHGC5Q9Y5F6 944 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 NAV1Q8NEY1 1877 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 NPM3O75607 178 aaKnown RBP12.14□□□□□ -0.47
CCDC40-203ENST00000374877 KRT79Q5XKE5 535 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 APOBEC3HQ6NTF7 200 aaKnown RBP12.14□□□□□ -0.47
CCDC40-203ENST00000374877 DNAAF5Q86Y56 855 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 TGFBRAP1Q8WUH2 860 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 RAD54LQ92698 747 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 PAGR1Q9BTK6 254 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 RIC8AQ9NPQ8 531 aa12.14□□□□□ -0.47
CCDC40-203ENST00000374877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC40-203ENST00000374877 TMCO5BA8MYB1 307 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 F8W031 263 aaPredicted RBP12.13□□□□□ -0.47
CCDC40-203ENST00000374877 SLC37A4O43826 429 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 TDP2O95551 362 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 ASIC2Q16515 512 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 ANKS1AQ92625 1134 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 PIGSQ96S52 555 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 GMLQ99445 158 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 ISCUQ9H1K1 167 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 PLCB1Q9NQ66 1216 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 GMNCA6NCL1 334 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 CHUKO15111 745 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 EMC10Q5UCC4 262 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 PPP4R3AQ6IN85 833 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 AGBL3Q8NEM8 1001 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 LRRC45Q96CN5 670 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 RAB34Q9BZG1 259 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 UBA5Q9GZZ9 404 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 SLC40A1Q9NP59 571 aa12.13□□□□□ -0.47
CCDC40-203ENST00000374877 CCDC172P0C7W6 258 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 SMTNP53814 917 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 COASYQ13057 564 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 NLGN2Q8NFZ4 835 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 GIMAP7Q8NHV1 300 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 UIMC1Q96RL1 719 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 LZTS2Q9BRK4 669 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 DDX47Q9H0S4 455 aaKnown RBP12.12□□□□□ -0.47
CCDC40-203ENST00000374877 MARCH6O60337 910 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 SCNN1DP51172 638 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 FAM26FQ5R3K3 315 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 CDC42EP5Q6NZY7 148 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 KIAA0825Q8IV33 1275 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 MAPKAPK5Q8IW41 473 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 JDP2Q8WYK2 163 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 SYN2Q92777 582 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-203ENST00000374877 ZKSCAN4Q969J2 545 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-203ENST00000374877 SPZ1Q9BXG8 430 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 USP40Q9NVE5 1235 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 FOCADQ5VW36 1801 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 CLSTN1O94985 981 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 CACNB1Q02641 598 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-203ENST00000374877 ZNF844Q08AG5 666 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 UAP1Q16222 522 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-203ENST00000374877 ILDR2Q71H61 639 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 CEP57Q86XR8 500 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 ZNF287Q9HBT7 754 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 DDX20Q9UHI6 824 aaKnown RBP12.12□□□□□ -0.47
CCDC40-203ENST00000374877 FBXL5Q9UKA1 691 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 HDAC9Q9UKV0 1011 aa12.12□□□□□ -0.47
CCDC40-203ENST00000374877 NOVA2Q9UNW9 492 aaKnown RBP12.12□□□□□ -0.47
CCDC40-203ENST00000374877 KIF4AO95239 1232 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 QPCTQ16769 361 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 LRIG3Q6UXM1 1119 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 RUFY4Q6ZNE9 571 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 GJA10Q969M2 543 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 MTMR9Q96QG7 549 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 FGFBP2Q9BYJ0 223 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 NEUROG2Q9H2A3 272 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 ZHX3Q9H4I2 956 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 PANK4Q9NVE7 773 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 SART1O43290 800 aaKnown RBP12.11□□□□□ -0.47
CCDC40-203ENST00000374877 TNNI2P48788 182 aa12.11□□□□□ -0.47
CCDC40-203ENST00000374877 PSMD2Q13200 908 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms