RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 NAALADL2Q58DX5 795 aa12.54□□□□□ -0.4
ABCA1-201ENST00000374733 ANKRD54Q6NXT1 300 aa12.54□□□□□ -0.4
ABCA1-201ENST00000374733 LLGL2Q6P1M3 1020 aa12.54□□□□□ -0.4
ABCA1-201ENST00000374733 SYCE2Q6PIF2 218 aa12.54□□□□□ -0.4
ABCA1-201ENST00000374733 ZC3H14Q6PJT7 736 aaKnown RBP12.54□□□□□ -0.4
ABCA1-201ENST00000374733 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
ABCA1-201ENST00000374733 ZNF689Q96CS4 500 aaPredicted RBP12.54□□□□□ -0.4
ABCA1-201ENST00000374733 GMCL1Q96IK5 515 aa12.54□□□□□ -0.4
ABCA1-201ENST00000374733 RTP3Q9BQQ7 232 aa12.54□□□□□ -0.4
ABCA1-201ENST00000374733 POMKQ9H5K3 350 aa12.54□□□□□ -0.4
ABCA1-201ENST00000374733 EVA1BQ9NVM1 165 aa12.54□□□□□ -0.4
ABCA1-201ENST00000374733 MTMR7Q9Y216 660 aa12.54□□□□□ -0.4
ABCA1-201ENST00000374733 ZZEF1O43149 2961 aa12.53□□□□□ -0.4
ABCA1-201ENST00000374733 AP1G2O75843 785 aa12.53□□□□□ -0.4
ABCA1-201ENST00000374733 RPS6P62753 249 aaKnown RBP12.53□□□□□ -0.4
ABCA1-201ENST00000374733 PRKD2Q9BZL6 878 aa12.53□□□□□ -0.4
ABCA1-201ENST00000374733 ERVK-5Q9HDB9 667 aa12.53□□□□□ -0.4
ABCA1-201ENST00000374733 NCDNQ9UBB6 729 aa12.53□□□□□ -0.4
ABCA1-201ENST00000374733 FSD2A1L4K1 749 aa12.52□□□□□ -0.41
ABCA1-201ENST00000374733 C17orf102A2RUQ5 167 aa12.52□□□□□ -0.41
ABCA1-201ENST00000374733 TREHO43280 583 aa12.52□□□□□ -0.41
ABCA1-201ENST00000374733 DGKIO75912 1065 aa12.52□□□□□ -0.41
ABCA1-201ENST00000374733 ZNF444Q8N0Y2 327 aaPredicted RBP12.52□□□□□ -0.41
ABCA1-201ENST00000374733 SIX5Q8N196 739 aa12.52□□□□□ -0.41
ABCA1-201ENST00000374733 CRIPAKQ8N1N5 446 aa12.52□□□□□ -0.41
ABCA1-201ENST00000374733 TDRD5Q8NAT2 981 aaKnown RBP12.52□□□□□ -0.41
ABCA1-201ENST00000374733 DNERQ8NFT8 737 aa12.52□□□□□ -0.41
ABCA1-201ENST00000374733 SSH3Q8TE77 659 aa12.52□□□□□ -0.41
ABCA1-201ENST00000374733 CDCA3Q99618 268 aaPredicted RBP12.52□□□□□ -0.41
ABCA1-201ENST00000374733 FBXL21Q9UKT6 434 aa12.52□□□□□ -0.41
ABCA1-201ENST00000374733 CEP295Q9C0D2 2601 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 B4DLN1 442 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 SORBS3O60504 671 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 PLA2G6O60733 806 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
ABCA1-201ENST00000374733 TSPY3P0CV98 308 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 TSPY8P0CW00 308 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 MRPL12P52815 198 aaKnown RBP12.51□□□□□ -0.41
ABCA1-201ENST00000374733 CTDSPL2Q05D32 466 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 KCNH2Q12809 1159 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 CCDC96Q2M329 555 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 PLA2G2CQ5R387 149 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 PPTC7Q8NI37 304 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 CLEC4DQ8WXI8 215 aa12.51□□□□□ -0.41
ABCA1-201ENST00000374733 RANBP17Q9H2T7 1088 aaKnown RBP12.51□□□□□ -0.41
ABCA1-201ENST00000374733 GCN1Q92616 2671 aaKnown RBP12.5□□□□□ -0.41
ABCA1-201ENST00000374733 CAND2O75155 1236 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 GHRP10912 638 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 RFX1P22670 979 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 SLC16A2P36021 539 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 PPM1JQ5JR12 505 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 RCSD1Q6JBY9 416 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 CMTR2Q8IYT2 770 aaKnown RBP12.5□□□□□ -0.41
ABCA1-201ENST00000374733 SUMF1Q8NBK3 374 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 RTKNQ9BST9 563 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 C1orf115Q9H7X2 142 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 NOP58Q9Y2X3 529 aaKnown RBP12.5□□□□□ -0.41
ABCA1-201ENST00000374733 PLIN4Q96Q06 1357 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
ABCA1-201ENST00000374733 WEE2P0C1S8 567 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 SP9P0CG40 484 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 SMIM10L2AP0DMW4 78 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 SMIM10L2BP0DMW5 78 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 ERVFC1P60507 584 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 LMNB2Q03252 620 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 KCNC3Q14003 757 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 SBK1Q52WX2 424 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 SPECC1Q5M775 1068 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 PLPP4Q5VZY2 271 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 CES5AQ6NT32 575 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 TMEM184AQ6ZMB5 413 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 EMID1Q96A84 441 aaPredicted RBP12.49□□□□□ -0.41
ABCA1-201ENST00000374733 NECTIN4Q96NY8 510 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.49□□□□□ -0.41
ABCA1-201ENST00000374733 IL1RAPL2Q9NP60 686 aa12.49□□□□□ -0.41
ABCA1-201ENST00000374733 FLNBO75369 2602 aaKnown RBP12.49□□□□□ -0.41
ABCA1-201ENST00000374733 DENND4AQ7Z401 1863 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 PRR5-ARHGAP8B1AHC4 643 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 ENPP3O14638 875 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 KINO60870 393 aaKnown RBP12.48□□□□□ -0.41
ABCA1-201ENST00000374733 HOXB8P17481 243 aaPredicted RBP12.48□□□□□ -0.41
ABCA1-201ENST00000374733 CTHP32929 405 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 GATMP50440 423 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 ARHGAP8P85298 464 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 ATP8B2P98198 1209 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 LAMC2Q13753 1193 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 TTBK2Q6IQ55 1244 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 LIAT1Q6ZQX7 453 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 ZDHHC14Q8IZN3 488 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 PUS7LQ9H0K6 701 aaKnown RBP12.48□□□□□ -0.41
ABCA1-201ENST00000374733 BCL11AQ9H165 835 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 ZNF287Q9HBT7 754 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 DDX41Q9UJV9 622 aaKnown RBP12.48□□□□□ -0.41
ABCA1-201ENST00000374733 STX8Q9UNK0 236 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 TNNQ9UQP3 1299 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 MRVI1Q9Y6F6 885 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 KAT6AQ92794 2004 aa12.48□□□□□ -0.41
ABCA1-201ENST00000374733 FNDC1Q4ZHG4 1894 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms