RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 NKRFO15226 690 aaKnown RBP eCLIP19.59■□□□□ 0.73
PFDN6-201ENST00000374606 MED24O75448 989 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 MYCNP04198 464 aaPredicted RBP19.59■□□□□ 0.73
PFDN6-201ENST00000374606 FOSL2P15408 326 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 RPA1P27694 616 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 DUSP28Q4G0W2 176 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 TMEM119Q4V9L6 283 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 PRAMEF19Q5SWL8 479 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 HYIQ5T013 277 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 MIS18BP1Q6P0N0 1132 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 CEP57L1Q8IYX8 460 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 COPS5Q92905 334 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 CCDC34Q96HJ3 373 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 DYDC2Q96IM9 177 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 PNMA5Q96PV4 448 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 PLIN2Q99541 437 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 POLR3CQ9BUI4 534 aaPredicted RBP19.59■□□□□ 0.73
PFDN6-201ENST00000374606 NUP62CLQ9H1M0 184 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 BCAS3Q9H6U6 928 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 TUFT1Q9NNX1 390 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 STK17AQ9UEE5 414 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 PCDHA10Q9Y5I2 948 aa19.59■□□□□ 0.73
PFDN6-201ENST00000374606 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.58■□□□□ 0.72
PFDN6-201ENST00000374606 PSAPP07602 524 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 SMPD1P17405 629 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 TNFAIP2Q03169 654 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 E2F4Q16254 413 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 POTEGQ6S5H5 508 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 KRBA2Q6ZNG9 492 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 CATSPER3Q86XQ3 398 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 CNNM3Q8NE01 707 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 TIGD1Q96MW7 591 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 LXNQ9BS40 222 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 CUEDC2Q9H467 287 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 RGL1Q9NZL6 768 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 SERTAD1Q9UHV2 236 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 FAM184BQ9ULE4 1060 aa19.58■□□□□ 0.72
PFDN6-201ENST00000374606 LOXHD1Q8IVV2 1947 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 PRUNE2Q8WUY3 3088 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 TMEM265A0A087WTH1 108 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 ACTN4O43707 911 aaKnown RBP19.57■□□□□ 0.72
PFDN6-201ENST00000374606 SUPT20HL2P0C7V6 817 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 SPATA31C1P0DKV0 1188 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 AKR1A1P14550 325 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 MUTP22033 750 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 ARHGAP1Q07960 439 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 LAMC2Q13753 1193 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 CTTNQ14247 550 aaKnown RBP19.57■□□□□ 0.72
PFDN6-201ENST00000374606 TMEM63BQ5T3F8 832 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 CCDC183Q5T5S1 534 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 C1orf53Q5VUE5 145 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 SH3RF1Q7Z6J0 888 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 BANK1Q8NDB2 785 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 SPATA33Q96N06 139 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 HSD17B14Q9BPX1 270 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 CLSTN2Q9H4D0 955 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 MAGEF1Q9HAY2 307 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 TMEM63CQ9P1W3 806 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 KIAA1024Q9UPX6 916 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 WDR81Q562E7 1941 aa19.57■□□□□ 0.72
PFDN6-201ENST00000374606 TRIM43BA6NCK2 446 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 P4HBP07237 508 aaKnown RBP19.56■□□□□ 0.72
PFDN6-201ENST00000374606 SLFN14P0C7P3 912 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 QARSP47897 775 aaKnown RBP19.56■□□□□ 0.72
PFDN6-201ENST00000374606 LRRC41Q15345 812 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 ECM1Q16610 540 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 LONRF3Q496Y0 759 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 ABHD15Q6UXT9 468 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 TPH2Q8IWU9 490 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 OR6J1Q8NGC5 347 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 SEPT1Q8WYJ6 367 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 ATP6V0A1Q93050 837 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 EMID1Q96A84 441 aaPredicted RBP19.56■□□□□ 0.72
PFDN6-201ENST00000374606 TRIM43Q96BQ3 446 aaPredicted RBP19.56■□□□□ 0.72
PFDN6-201ENST00000374606 TNMDQ9H2S6 317 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 TELO2Q9Y4R8 837 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 CDH23Q9H251 3354 aa19.56■□□□□ 0.72
PFDN6-201ENST00000374606 BACH1O14867 736 aa19.55■□□□□ 0.72
PFDN6-201ENST00000374606 DKC1O60832 514 aaKnown RBP eCLIP19.55■□□□□ 0.72
PFDN6-201ENST00000374606 SLITRK3O94933 977 aa19.55■□□□□ 0.72
PFDN6-201ENST00000374606 TCF7P36402 384 aaPredicted RBP19.55■□□□□ 0.72
PFDN6-201ENST00000374606 PSMC5P62195 406 aa19.55■□□□□ 0.72
PFDN6-201ENST00000374606 NAALADL2Q58DX5 795 aa19.55■□□□□ 0.72
PFDN6-201ENST00000374606 KANK3Q6NY19 840 aa19.55■□□□□ 0.72
PFDN6-201ENST00000374606 PDXDC2PQ6P474 469 aa19.55■□□□□ 0.72
PFDN6-201ENST00000374606 KCTD17Q8N5Z5 321 aa19.55■□□□□ 0.72
PFDN6-201ENST00000374606 RNPC3Q96LT9 517 aaKnown RBP19.55■□□□□ 0.72
PFDN6-201ENST00000374606 GPR20Q99678 358 aa19.55■□□□□ 0.72
PFDN6-201ENST00000374606 ZSWIM4Q9H7M6 989 aa19.55■□□□□ 0.72
PFDN6-201ENST00000374606 GABBR1Q9UBS5 961 aa19.55■□□□□ 0.72
PFDN6-201ENST00000374606 HOOK1Q9UJC3 728 aaKnown RBP19.55■□□□□ 0.72
PFDN6-201ENST00000374606 IGSF9BQ9UPX0 1349 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 GSTTP1A0A1W2PQM5 241 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 CTAGE5O15320 804 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 ADCY6O43306 1168 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 ATG7O95352 703 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 PTGS1P23219 599 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 TLE2Q04725 743 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 CAMK4Q16566 473 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 UGCGQ16739 394 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms