RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ANXA13P27216 316 aa11.33□□□□□ -0.59
NUP188-201ENST00000372577 PPM1FP49593 454 aaPredicted RBP11.33□□□□□ -0.59
NUP188-201ENST00000372577 TRIM42Q8IWZ5 723 aa11.33□□□□□ -0.59
NUP188-201ENST00000372577 TUFT1Q9NNX1 390 aa11.33□□□□□ -0.59
NUP188-201ENST00000372577 A0A1B0GUA9 196 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 PFDN6O15212 129 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 SART1O43290 800 aaKnown RBP11.33□□□□□ -0.6
NUP188-201ENST00000372577 MORC4Q8TE76 937 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 ENTPD3O75355 529 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 IGBP1P78318 339 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 FAM47CQ5HY64 1035 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 PADI6Q6TGC4 694 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 EXOC4Q96A65 974 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 ZBTB9Q96C00 473 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 RMDN3Q96TC7 470 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 LIMA1Q9UHB6 759 aaKnown RBP11.33□□□□□ -0.6
NUP188-201ENST00000372577 SYNGAP1Q96PV0 1343 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 H7C0C1 242 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 PODXLO00592 558 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 KCNQ2O43526 872 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 SORBS3O60504 671 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 PRR29P0C7W0 189 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 ATP5OP48047 213 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 IL9RQ01113 521 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 PRPSAP1Q14558 356 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 MAP3K21Q5TCX8 1036 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 SDCCAG8Q86SQ7 713 aaPredicted RBP11.33□□□□□ -0.6
NUP188-201ENST00000372577 RFX6Q8HWS3 928 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 PROCA1Q8NCQ7 364 aaPredicted RBP11.33□□□□□ -0.6
NUP188-201ENST00000372577 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.33□□□□□ -0.61e-9■■■□□ 15.8
NUP188-201ENST00000372577 MSTO1Q9BUK6 570 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 NYAP2Q9P242 653 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.33□□□□□ -0.6
NUP188-201ENST00000372577 ITIH6Q6UXX5 1313 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 TNFAIP2Q03169 654 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 C16orf86Q6ZW13 317 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 GPATCH11Q8N954 259 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 RUBCNQ92622 972 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 MTMR4Q9NYA4 1195 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 TUBE1Q9UJT0 475 aa11.33□□□□□ -0.6
NUP188-201ENST00000372577 SPATA31A5Q5VU36 1347 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 SPATA31A7Q8IWB4 1347 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 GRID2IPA4D2P6 1211 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 MCF2LO15068 1137 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 FTCDO95954 541 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 QARSP47897 775 aaKnown RBP11.32□□□□□ -0.6
NUP188-201ENST00000372577 RWDD2BP57060 319 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 RNASELQ05823 741 aaKnown RBP11.32□□□□□ -0.6
NUP188-201ENST00000372577 C2orf54Q08AI8 447 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 FAM193BQ96PV7 902 aaPredicted RBP11.32□□□□□ -0.6
NUP188-201ENST00000372577 SNX25Q9H3E2 840 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 RPF1Q9H9Y2 349 aaKnown RBP11.32□□□□□ -0.6
NUP188-201ENST00000372577 DNAJC12Q9UKB3 198 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
NUP188-201ENST00000372577 USP17L15C9J2P7 530 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 USP17L13C9JLJ4 530 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 USP17L11C9JVI0 530 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 USP17L18D6R9N7 530 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 USP17L22D6RA61 530 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 USP17L17D6RBQ6 530 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 USP17L19D6RCP7 530 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 USP17L20D6RJB6 530 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 RGL2O15211 777 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 PEX3P56589 373 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 USP17L24Q0WX57 530 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 EPHA7Q15375 998 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 USP17L6PQ6QN14 398 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 ENOSF1Q7L5Y1 443 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 FRMD5Q7Z6J6 570 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 CFAP57Q96MR6 1250 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 ATP8B3O60423 1300 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 FLT1P17948 1338 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 CLCN6P51797 869 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 IRX4P78413 519 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 ADAT2Q7Z6V5 191 aaKnown RBP11.32□□□□□ -0.6
NUP188-201ENST00000372577 METTL16Q86W50 562 aaKnown RBP11.32□□□□□ -0.6
NUP188-201ENST00000372577 METTL23Q86XA0 190 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 ARHGEF2Q92974 986 aaKnown RBP11.32□□□□□ -0.6
NUP188-201ENST00000372577 PLEKHA4Q9H4M7 779 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 ADAMTS1Q9UHI8 967 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 KRT1P04264 644 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 TFAMQ00059 246 aaKnown RBP11.32□□□□□ -0.6
NUP188-201ENST00000372577 CYP27A1Q02318 531 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 NAA35Q5VZE5 725 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 VCXQ9H320 206 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 IPO11Q9UI26 975 aaKnown RBP11.32□□□□□ -0.6
NUP188-201ENST00000372577 ANAPC5Q9UJX4 755 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 DAGLAQ9Y4D2 1042 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 MROH1Q8NDA8 1641 aa11.32□□□□□ -0.6
NUP188-201ENST00000372577 E9PMD0 336 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 KIAA0391O15091 583 aaKnown RBP11.31□□□□□ -0.6
NUP188-201ENST00000372577 EYA4O95677 639 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 SRGAP2BP0DMP2 458 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 AKR1B1P15121 316 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 VPS41P49754 854 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 TOGARAM2Q6ZUX3 1019 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 TTC39CQ8N584 583 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 C7orf25Q9BPX7 421 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms