RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 SYNRGQ9UMZ2 1314 aa17.71■□□□□ 0.43
TMEM53-204ENST00000372243 CTAGE5O15320 804 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 ZNF862O60290 1169 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 EYA4O95677 639 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 KCNK18Q7Z418 384 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 LRRC15Q8TF66 581 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 DBR1Q9UK59 544 aaKnown RBP17.7■□□□□ 0.42
TMEM53-204ENST00000372243 E9PMD0 336 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 KPNA6O60684 536 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 ADAMTS4O75173 837 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 LGALS2P05162 132 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 CST5P28325 142 aaPredicted RBP17.7■□□□□ 0.42
TMEM53-204ENST00000372243 YWHABP31946 246 aaKnown RBP17.7■□□□□ 0.42
TMEM53-204ENST00000372243 FSCN1Q16658 493 aaKnown RBP17.7■□□□□ 0.42
TMEM53-204ENST00000372243 XKR3Q5GH77 459 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 SH3RF1Q7Z6J0 888 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 GLG1Q92896 1179 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 SYAP1Q96A49 352 aaPredicted RBP17.7■□□□□ 0.42
TMEM53-204ENST00000372243 FAM167AQ96KS9 214 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 C16orf70Q9BSU1 422 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.7■□□□□ 0.42
TMEM53-204ENST00000372243 TNMDQ9H2S6 317 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 XPNPEP3Q9NQH7 507 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 ANKEF1Q9NU02 776 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 KBTBD4Q9NVX7 518 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 ERAP1Q9NZ08 941 aa17.7■□□□□ 0.42
TMEM53-204ENST00000372243 STBD1O95210 358 aa17.69■□□□□ 0.42
TMEM53-204ENST00000372243 MYL1P05976 194 aa17.69■□□□□ 0.42
TMEM53-204ENST00000372243 ATP4AP20648 1035 aa17.69■□□□□ 0.42
TMEM53-204ENST00000372243 PSMC6P62333 389 aa17.69■□□□□ 0.42
TMEM53-204ENST00000372243 PRKCEQ02156 737 aa17.69■□□□□ 0.42
TMEM53-204ENST00000372243 UTP14CQ5TAP6 766 aaKnown RBP17.69■□□□□ 0.42
TMEM53-204ENST00000372243 LHX8Q68G74 356 aa17.69■□□□□ 0.42
TMEM53-204ENST00000372243 SV2BQ7L1I2 683 aa17.69■□□□□ 0.42
TMEM53-204ENST00000372243 OTUD6AQ7L8S5 288 aa17.69■□□□□ 0.42
TMEM53-204ENST00000372243 SYT2Q8N9I0 419 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-204ENST00000372243 LRRC27Q9C0I9 530 aa17.69■□□□□ 0.42
TMEM53-204ENST00000372243 CLSTN2Q9H4D0 955 aa17.69■□□□□ 0.42
TMEM53-204ENST00000372243 PAK6Q9NQU5 681 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-204ENST00000372243 HOOK1Q9UJC3 728 aaKnown RBP17.69■□□□□ 0.42
TMEM53-204ENST00000372243 ZNF215Q9UL58 517 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-204ENST00000372243 OATP04181 439 aa17.68■□□□□ 0.42
TMEM53-204ENST00000372243 C6orf222P0C671 652 aaPredicted RBP17.68■□□□□ 0.42
TMEM53-204ENST00000372243 PLA2G4BP0C869 781 aa17.68■□□□□ 0.42
TMEM53-204ENST00000372243 AMPD3Q01432 767 aa17.68■□□□□ 0.42
TMEM53-204ENST00000372243 ANO5Q75V66 913 aa17.68■□□□□ 0.42
TMEM53-204ENST00000372243 KLHDC9Q8NEP7 349 aa17.68■□□□□ 0.42
TMEM53-204ENST00000372243 PIGOQ8TEQ8 1089 aa17.68■□□□□ 0.42
TMEM53-204ENST00000372243 BBXQ8WY36 941 aaPredicted RBP17.68■□□□□ 0.42
TMEM53-204ENST00000372243 NUP62CLQ9H1M0 184 aa17.68■□□□□ 0.42
TMEM53-204ENST00000372243 NRBP2Q9NSY0 501 aa17.68■□□□□ 0.42
TMEM53-204ENST00000372243 FRMPD3Q5JV73 1810 aa17.68■□□□□ 0.42
TMEM53-204ENST00000372243 CENPFP49454 3210 aa17.68■□□□□ 0.42
TMEM53-204ENST00000372243 ZEB2O60315 1214 aa17.67■□□□□ 0.42
TMEM53-204ENST00000372243 F2P00734 622 aa17.67■□□□□ 0.42
TMEM53-204ENST00000372243 SLC12A3P55017 1021 aa17.67■□□□□ 0.42
TMEM53-204ENST00000372243 MDM2Q00987 491 aaPredicted RBP17.67■□□□□ 0.42
TMEM53-204ENST00000372243 MCM6Q14566 821 aa17.67■□□□□ 0.42
TMEM53-204ENST00000372243 GNASQ5JWF2 1037 aa17.67■□□□□ 0.42
TMEM53-204ENST00000372243 TRIM50Q86XT4 487 aa17.67■□□□□ 0.42
TMEM53-204ENST00000372243 ARMC5Q96C12 935 aa17.67■□□□□ 0.42
TMEM53-204ENST00000372243 PAGE5Q96GU1 130 aa17.67■□□□□ 0.42
TMEM53-204ENST00000372243 NIFKQ9BYG3 293 aaKnown RBP17.67■□□□□ 0.42
TMEM53-204ENST00000372243 BHMT2Q9H2M3 363 aa17.67■□□□□ 0.42
TMEM53-204ENST00000372243 PPME1Q9Y570 386 aa17.67■□□□□ 0.42
TMEM53-204ENST00000372243 H3BRB1 525 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 ZBTB39O15060 712 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 PGK1P00558 417 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 RARRES1P49788 294 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 BEX3Q00994 111 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 CCDC183Q5T5S1 534 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 CAVIN1Q6NZI2 390 aaKnown RBP17.66■□□□□ 0.42
TMEM53-204ENST00000372243 RNF180Q86T96 592 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 CKAP2LQ8IYA6 745 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 ATP8B4Q8TF62 1192 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 ZNF333Q96JL9 665 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 MTRQ99707 1265 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 UNC93B1Q9H1C4 597 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 TUT1Q9H6E5 874 aaKnown RBP17.66■□□□□ 0.42
TMEM53-204ENST00000372243 KCND2Q9NZV8 630 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 TMEM63CQ9P1W3 806 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 MYADML2A6NDP7 307 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 HBP1O60381 514 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 ZNF286BP0CG31 522 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 CCL5P13501 91 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 IRX5P78411 483 aaPredicted RBP17.66■□□□□ 0.42
TMEM53-204ENST00000372243 PURAQ00577 322 aaKnown RBP17.66■□□□□ 0.42
TMEM53-204ENST00000372243 POSTNQ15063 836 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 PLCB4Q15147 1175 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 CCSAPQ6IQ19 270 aaPredicted RBP17.66■□□□□ 0.42
TMEM53-204ENST00000372243 CNNM4Q6P4Q7 775 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 PCSK9Q8NBP7 692 aaKnown RBP17.66■□□□□ 0.42
TMEM53-204ENST00000372243 KATNAL1Q9BW62 490 aa17.66■□□□□ 0.42
TMEM53-204ENST00000372243 ARID2Q68CP9 1835 aa17.65■□□□□ 0.42
TMEM53-204ENST00000372243 A0A087WWV3 80 aa17.65■□□□□ 0.42
TMEM53-204ENST00000372243 AFMP43652 599 aa17.65■□□□□ 0.42
TMEM53-204ENST00000372243 MTFR1Q15390 333 aa17.65■□□□□ 0.42
TMEM53-204ENST00000372243 KAT2BQ92831 832 aa17.65■□□□□ 0.42
TMEM53-204ENST00000372243 CCDC43Q96MW1 224 aaKnown RBP17.65■□□□□ 0.42
TMEM53-204ENST00000372243 C7orf25Q9BPX7 421 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms