RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 C17orf80Q9BSJ5 609 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 FAM49AQ9H0Q0 323 aaPredicted RBP12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 SUGCTQ9HAC7 445 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 CDHR5Q9HBB8 845 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 MTUS1Q9ULD2 1270 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 EVPLQ92817 2033 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 POTEB3A0JP26 581 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 LARGE1O95461 756 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 LINC00271P0C7V0 271 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 GNA11P29992 359 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 ERVK-21P61565 698 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 SWSAP1Q6NVH7 229 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 TAF2Q6P1X5 1199 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 POTEBQ6S5H4 581 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 MTHFD1LQ6UB35 978 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 ZNF577Q9BSK1 485 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 IFIH1Q9BYX4 1025 aaKnown RBP12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 AZI2Q9H6S1 392 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 SH3GLB2Q9NR46 395 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 KCNJ14Q9UNX9 436 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 TRPC6Q9Y210 931 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 PCDHA2Q9Y5H9 948 aa12.48□□□□□ -0.41
EXOSC1-202ENST00000370885 RRN3P2A6NIE6 340 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 ENPP3O14638 875 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 ZNF862O60290 1169 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 EFCAB14O75071 495 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 UPP2O95045 317 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 TDP2O95551 362 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 AMHP03971 560 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 KLRC1P26715 233 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 CD52P31358 61 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 AK2P54819 239 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 NLRP5P59047 1200 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 MRPS6P82932 125 aaKnown RBP12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 AKAP17AQ02040 695 aaKnown RBP12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 TFF2Q03403 129 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 UGCGQ16739 394 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 KIAA0319LQ8IZA0 1049 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 CRIPAKQ8N1N5 446 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 TBCKQ8TEA7 893 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 CCDC12Q8WUD4 166 aaPredicted RBP12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 IL17RAQ96F46 866 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 ZNF302Q9NR11 478 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 PCDHA4Q9UN74 947 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 MAFBQ9Y5Q3 323 aaPredicted RBP12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 TTC3P53804 2025 aa12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 MYH9P35579 1960 aaKnown RBP12.47□□□□□ -0.41
EXOSC1-202ENST00000370885 BRWD1Q9NSI6 2320 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 BACH1O14867 736 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 PFKFB2O60825 505 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 DEXIO95424 95 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 FDPSP14324 419 aaKnown RBP12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 ST3GAL1Q11201 340 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 EARS2Q5JPH6 523 aaKnown RBP12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 ZNF746Q6NUN9 644 aaPredicted RBP12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 PDXDC2PQ6P474 469 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 TRMT1LQ7Z2T5 733 aaKnown RBP12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 BLIDQ8IZY5 108 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 CCDC148Q8NFR7 591 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 OXER1Q8TDS5 423 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 ATP8B4Q8TF62 1192 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 TMEM40Q8WWA1 233 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 SLC5A5Q92911 643 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 TGS1Q96RS0 853 aaKnown RBP12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 TMX1Q9H3N1 280 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 RC3H2Q9HBD1 1191 aaKnown RBP12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 INSL6Q9Y581 213 aa12.46□□□□□ -0.41
EXOSC1-202ENST00000370885 BDP1A6H8Y1 2624 aa12.46□□□□□ -0.42
EXOSC1-202ENST00000370885 TCF20Q9UGU0 1960 aaKnown RBP12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 ATG2AQ2TAZ0 1938 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 NLRC5Q86WI3 1866 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 SMIM35A0A1B0GVV1 85 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 HBP1O60381 514 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 STBD1O95210 358 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 C22orf31O95567 290 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 USP11P51784 963 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 SETQ01105 290 aaPredicted RBP12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 ME3Q16798 604 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 TMEM266Q2M3C6 531 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 MCTP2Q6DN12 878 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 MIS18BP1Q6P0N0 1132 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 B3GNT9Q6UX72 402 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 TSHZ1Q6ZSZ6 1077 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 NECAB1Q8N987 351 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 DAGLBQ8NCG7 672 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 BICD2Q8TD16 824 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 APBB2Q92870 758 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 MBOAT7Q96N66 472 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 ASB2Q96Q27 587 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 PHF20Q9BVI0 1012 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 CELF4Q9BZC1 486 aaKnown RBP12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 UNC45AQ9H3U1 944 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 TBC1D22BQ9NU19 505 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 GABBR1Q9UBS5 961 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 PADI3Q9ULW8 664 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 TRPV2Q9Y5S1 764 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 MYO7AQ13402 2215 aa12.45□□□□□ -0.42
EXOSC1-202ENST00000370885 IGSF9BQ9UPX0 1349 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms