RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ATP2C2O75185 946 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 DDNO94850 711 aaPredicted RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 EEF1GP26641 437 aaKnown RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 GGCXP38435 758 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 PMS1P54277 932 aaKnown RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 LRCH2Q5VUJ6 765 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 KRT26Q7Z3Y9 468 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 GPBP1Q86WP2 473 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 KCTD17Q8N5Z5 321 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 CRACR2AQ9BSW2 395 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 VPS16Q9H269 839 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 PANK4Q9NVE7 773 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 HDAC6Q9UBN7 1215 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 CDC23Q9UJX2 597 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 PITPNM2Q9BZ72 1349 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 ATP1A2P50993 1020 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 ENOX2Q16206 610 aaKnown RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 TMEM139Q8IV31 216 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 GUF1Q8N442 669 aaKnown RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 TC2NQ8N9U0 490 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 KIAA0895Q8NCT3 520 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 POLR3CQ9BUI4 534 aaPredicted RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 ADARB2Q9NS39 739 aaKnown RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 TAB2Q9NYJ8 693 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 VAV3Q9UKW4 847 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 CTAGE9A4FU28 777 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 NFIBO00712 420 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 POTEGQ6S5H5 508 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 POTEEQ6S8J3 1075 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 CLEC4DQ8WXI8 215 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 N4BP2L2Q92802 583 aaPredicted RBP10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 HPS3Q969F9 1004 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 HOMER2Q9NSB8 354 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 TMOD4Q9NZQ9 345 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 GAS7O60861 476 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 FGFR1OPO95684 399 aaKnown RBP10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 MATR3P43243 847 aaKnown RBP eCLIP10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 KCNJ6P48051 423 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 HMGCS2P54868 508 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 MAP9Q49MG5 647 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 ANKRD40Q6AI12 368 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 SLC5A5Q92911 643 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 DCPSQ96C86 337 aaKnown RBP10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 DNAJC19Q96DA6 116 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 C12orf42Q96LP6 360 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 EIF2AK1Q9BQI3 630 aaKnown RBP10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 ZNF577Q9BSK1 485 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 WDR11Q9BZH6 1224 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 GUCA1BQ9UMX6 200 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 FZD1Q9UP38 647 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 MEIS1O00470 390 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 VWA5AO00534 786 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 SPATA31C1P0DKV0 1188 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 COASYQ13057 564 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 NOL9Q5SY16 702 aaKnown RBP10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 RAD9BQ6WBX8 426 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 OTOP1Q7RTM1 612 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 CEP112Q8N8E3 955 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 MXRA8Q9BRK3 442 aa10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 POLR2AP24928 1970 aaKnown RBP10.98□□□□□ -0.65
PRPF38B-203ENST00000370025 AKR1B15C9JRZ8 316 aaPredicted RBP10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 PSMD10O75832 226 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 PAX7P23759 505 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 GNGT1P63211 74 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 GHRHRQ02643 423 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 PRKG1Q13976 671 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 FAM26FQ5R3K3 315 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 KCTD16Q68DU8 428 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 CENPPQ6IPU0 288 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 IRF2BP1Q8IU81 584 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 SULF1Q8IWU6 871 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 SUGP1Q8IWZ8 645 aaKnown RBP10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 ATG4CQ96DT6 458 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 TSG101Q99816 390 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 DUSP9Q99956 384 aaKnown RBP10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 SYT17Q9BSW7 474 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 TRIM10Q9UDY6 481 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 GOLGA6CA6NDK9 693 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 GOLGA6DP0CG33 693 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 CYP11B2P19099 503 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 PBX1P40424 430 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 CYP4A11Q02928 519 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 EHHADHQ08426 723 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 PPP2R5CQ13362 524 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 E2F5Q15329 346 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 ITIH6Q6UXX5 1313 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 SYT2Q8N9I0 419 aaPredicted RBP10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 CEP89Q96ST8 783 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 TEKT3Q9BXF9 490 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 TUFT1Q9NNX1 390 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 GOLGA6AQ9NYA3 693 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 SYF2O95926 243 aaKnown RBP10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 RPSAP08865 295 aaKnown RBP10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 SLC12A3P55017 1021 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 UBXN1Q04323 297 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■■■■□ 25.6
PRPF38B-203ENST00000370025 COG2Q14746 738 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms