RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CPVLQ9H3G5 476 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 KDM3AQ9Y4C1 1321 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 GSTTP1A0A1W2PQM5 241 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 TMEM232C9JQI7 657 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 FMNL1O95466 1100 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-204ENST00000369530 KCNC3Q14003 757 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 CCDC144BQ3MJ40 725 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 CDCA2Q69YH5 1023 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-204ENST00000369530 TLDC1Q6P9B6 456 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 STK11IPQ8N1F8 1099 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 NCOA7Q8NI08 942 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 LRRC15Q8TF66 581 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 TCP11Q8WWU5 503 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 HOMER3Q9NSC5 361 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 PPFIA3O75145 1194 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 MMP3P08254 477 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 CCDC192P0DO97 292 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 HOXD10P28358 340 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 PRPHP41219 470 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 SCRN1Q12765 414 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 SH3RF1Q7Z6J0 888 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 MAB21L3Q8N8X9 362 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 FANCBQ8NB91 859 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 CABP5Q9NP86 173 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 SPENQ96T58 3664 aaKnown RBP7.67□□□□□ -1.18
CSDE1-204ENST00000369530 H3BQF6 201 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 NKRFO15226 690 aaKnown RBP eCLIP7.67□□□□□ -1.18
CSDE1-204ENST00000369530 FCER1AP12319 257 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 FNTAP49354 379 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 IMMTQ16891 758 aaKnown RBP7.67□□□□□ -1.18
CSDE1-204ENST00000369530 SLC9C1Q4G0N8 1177 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 POTEDQ86YR6 584 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 CHURC1Q8WUH1 139 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 LENG1Q96BZ8 264 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-204ENST00000369530 ZNF689Q96CS4 500 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-204ENST00000369530 CHAMP1Q96JM3 812 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 MTMR9Q96QG7 549 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 TAAR1Q96RJ0 339 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 GPR20Q99678 358 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 BAG1Q99933 345 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-204ENST00000369530 LRRC2Q9BYS8 371 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 C11orf49Q9H6J7 331 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 MAFBQ9Y5Q3 323 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-204ENST00000369530 CHD5Q8TDI0 1954 aa7.67□□□□□ -1.18
CSDE1-204ENST00000369530 BSNQ9UPA5 3926 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 FLOT1O75955 427 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 PSMA5P28066 241 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 RPS6KA3P51812 740 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 SLC8A3P57103 927 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 HAND2P61296 217 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 TBC1D25Q3MII6 688 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 ARHGAP29Q52LW3 1261 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 PRAMEF19Q5SWL8 479 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 NFRKBQ6P4R8 1299 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 NECAB1Q8N987 351 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 TSPAN18Q96SJ8 248 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 ZFHX4Q86UP3 3567 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 FRMPD2Q68DX3 1309 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-204ENST00000369530 ADD1P35611 737 aaKnown RBP7.66□□□□□ -1.18
CSDE1-204ENST00000369530 SLC16A2P36021 539 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 ACLYP53396 1101 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 AK2P54819 239 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 BRD3Q15059 726 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 CELF3Q5SZQ8 465 aaKnown RBP7.66□□□□□ -1.18
CSDE1-204ENST00000369530 RNF146Q9NTX7 359 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 DNAI1Q9UI46 699 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 FANCMQ8IYD8 2048 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 CCDC151A5D8V7 595 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 USP27XA6NNY8 438 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 KINO60870 393 aaKnown RBP7.66□□□□□ -1.18
CSDE1-204ENST00000369530 PPFIA2O75334 1257 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 FSBPO95073 299 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 MYBL2P10244 700 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 SOX10P56693 466 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 HTRA4P83105 476 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-204ENST00000369530 TTLL12Q14166 644 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-204ENST00000369530 SLC5A5Q92911 643 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 RNF26Q9BY78 433 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-204ENST00000369530 GDPD2Q9HCC8 539 aa7.66□□□□□ -1.18
CSDE1-204ENST00000369530 FAM86B1E9PN63 330 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 TNPO2O14787 897 aaKnown RBP7.65□□□□□ -1.18
CSDE1-204ENST00000369530 PRC1O43663 620 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 FAM86B2P0C5J1 330 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 TGFB3P10600 412 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 SNAP25P60880 206 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 AP1ARQ63HQ0 302 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 NAIF1Q69YI7 327 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-204ENST00000369530 ABHD15Q6UXT9 468 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 RBM12BQ8IXT5 1001 aaKnown RBP7.65□□□□□ -1.18
CSDE1-204ENST00000369530 TMEM174Q8WUU8 243 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 HERVK_113Q902F9 699 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 ZKSCAN3Q9BRR0 538 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 NOC4LQ9BVI4 516 aaKnown RBP7.65□□□□□ -1.18
CSDE1-204ENST00000369530 TRAIPQ9BWF2 469 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 TRIM6Q9C030 488 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-204ENST00000369530 IMPACTQ9P2X3 320 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 RAB21Q9UL25 225 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 ZMYM2Q9UBW7 1377 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 MINDY4BA8MYZ0 360 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 H0YGN5 161 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms