RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 PLCB4Q15147 1175 aa13.74□□□□□ -0.21
LINC01561-201ENST00000369071 RNF187Q5TA31 235 aaPredicted RBP13.74□□□□□ -0.21
LINC01561-201ENST00000369071 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
LINC01561-201ENST00000369071 ALKBH5Q6P6C2 394 aaKnown RBP13.74□□□□□ -0.21
LINC01561-201ENST00000369071 C3orf20Q8ND61 904 aa13.74□□□□□ -0.21
LINC01561-201ENST00000369071 DDX47Q9H0S4 455 aaKnown RBP13.74□□□□□ -0.21
LINC01561-201ENST00000369071 CENPHQ9H3R5 247 aa13.74□□□□□ -0.21
LINC01561-201ENST00000369071 CD209Q9NNX6 404 aa13.74□□□□□ -0.21
LINC01561-201ENST00000369071 PPANQ9NQ55 473 aaKnown RBP13.74□□□□□ -0.21
LINC01561-201ENST00000369071 TRAF3IP3Q9Y228 551 aa13.74□□□□□ -0.21
LINC01561-201ENST00000369071 ARFGEF1Q9Y6D6 1849 aa13.74□□□□□ -0.21
LINC01561-201ENST00000369071 GAKO14976 1311 aa13.74□□□□□ -0.21
LINC01561-201ENST00000369071 SPATA31A5Q5VU36 1347 aa13.74□□□□□ -0.21
LINC01561-201ENST00000369071 SPATA31A7Q8IWB4 1347 aa13.74□□□□□ -0.21
LINC01561-201ENST00000369071 GMNCA6NCL1 334 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 TRAPPC3O43617 180 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 AFPP02771 609 aaKnown RBP13.73□□□□□ -0.21
LINC01561-201ENST00000369071 AKR1B1P15121 316 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 ANXA13P27216 316 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 CASP5P51878 434 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 MRPL12P52815 198 aaKnown RBP13.73□□□□□ -0.21
LINC01561-201ENST00000369071 GSCP56915 257 aaPredicted RBP13.73□□□□□ -0.21
LINC01561-201ENST00000369071 GABPAQ06546 454 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 DRP2Q13474 957 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 AGBL2Q5U5Z8 902 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 RUFY4Q6ZNE9 571 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 CCDC91Q7Z6B0 441 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 SEC14L1Q92503 715 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 SPAG5Q96R06 1193 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 KCNMB3Q9NPA1 279 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 FBXL5Q9UKA1 691 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 A0A0A6YYK5 440 aaPredicted RBP13.73□□□□□ -0.21
LINC01561-201ENST00000369071 KRIT1O00522 736 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 MED24O75448 989 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 ITGA4P13612 1032 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 HOXD13P35453 343 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 EIF6P56537 245 aaKnown RBP13.73□□□□□ -0.21
LINC01561-201ENST00000369071 MTMR3Q13615 1198 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 EPHA7Q15375 998 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 PTPROQ16827 1216 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 TTBK2Q6IQ55 1244 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 CLEC10AQ8IUN9 316 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 DHX36Q9H2U1 1008 aaKnown RBP13.73□□□□□ -0.21
LINC01561-201ENST00000369071 SIX2Q9NPC8 291 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 SUCLA2Q9P2R7 463 aaPredicted RBP13.73□□□□□ -0.21
LINC01561-201ENST00000369071 CNOT8Q9UFF9 292 aaKnown RBP13.73□□□□□ -0.21
LINC01561-201ENST00000369071 ARMCX3Q9UH62 379 aaPredicted RBP13.73□□□□□ -0.21
LINC01561-201ENST00000369071 SWAP70Q9UH65 585 aa13.73□□□□□ -0.21
LINC01561-201ENST00000369071 FLOT1O75955 427 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 IL1R1P14778 569 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 SMTNP53814 917 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 JAM2P57087 298 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 GPSM2P81274 684 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 EXOC3L4Q17RC7 722 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 BARGINQ6ZT62 677 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 EPM2AIP1Q7L775 607 aaPredicted RBP13.72□□□□□ -0.21
LINC01561-201ENST00000369071 CCDC13Q8IYE1 715 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 UIMC1Q96RL1 719 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 NAP1L4Q99733 375 aaKnown RBP13.72□□□□□ -0.21
LINC01561-201ENST00000369071 SLITRK6Q9H5Y7 841 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 PSTPIP2Q9H939 334 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 A1CFQ9NQ94 594 aaKnown RBP13.72□□□□□ -0.21
LINC01561-201ENST00000369071 DDX20Q9UHI6 824 aaKnown RBP13.72□□□□□ -0.21
LINC01561-201ENST00000369071 AMACRQ9UHK6 382 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 AJAP1Q9UKB5 411 aaPredicted RBP13.72□□□□□ -0.21
LINC01561-201ENST00000369071 DAPK3O43293 454 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 RASSF9O75901 435 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 PAEPP09466 180 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 TMOD1P28289 359 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 PPP2R2AP63151 447 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 GIT2Q14161 759 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 POTEAQ6S8J7 498 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 DPP8Q6V1X1 898 aaPredicted RBP13.72□□□□□ -0.21
LINC01561-201ENST00000369071 PEX26Q7Z412 305 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 TMC3Q7Z5M5 1100 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 NT5DC3Q86UY8 548 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 LMBR1Q8WVP7 490 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 UBLCP1Q8WVY7 318 aaPredicted RBP13.72□□□□□ -0.21
LINC01561-201ENST00000369071 MYCBPQ99417 103 aaPredicted RBP13.72□□□□□ -0.21
LINC01561-201ENST00000369071 INTUQ9ULD6 942 aa13.72□□□□□ -0.21
LINC01561-201ENST00000369071 FOCADQ5VW36 1801 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 C5orf60A6NFR6 353 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 TMCO5BA8MYB1 307 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 USP17L10C9JJH3 530 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 ZBTB5O15062 677 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 TTLL1O95922 423 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 KRT18P05783 430 aaKnown RBP13.71□□□□□ -0.21
LINC01561-201ENST00000369071 H2AFZP0C0S5 128 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 STAT3P40763 770 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 NPEPPSP55786 919 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 POU5F1Q01860 360 aaKnown RBP13.71□□□□□ -0.21
LINC01561-201ENST00000369071 QPCTQ16769 361 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.21
LINC01561-201ENST00000369071 H2AFVQ71UI9 128 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 HES6Q96HZ4 224 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 MBOAT7Q96N66 472 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 ZHX3Q9H4I2 956 aa13.71□□□□□ -0.21
LINC01561-201ENST00000369071 CYP3A7-CYP3A51PA0A087WV96 503 aa13.71□□□□□ -0.22
LINC01561-201ENST00000369071 POTEFA5A3E0 1075 aa13.71□□□□□ -0.22
LINC01561-201ENST00000369071 DDX3XO00571 662 aaKnown RBP eCLIP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms