RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ARHGDIAP52565 204 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 MXD4Q14582 209 aaPredicted RBP19.52■□□□□ 0.72
SNX27-202ENST00000368841 ERICH1Q86X53 443 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 PYROXD1Q8WU10 500 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 HPS4Q9NQG7 708 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 TMEM260Q9NX78 707 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 GTSE1Q9NYZ3 720 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 SERPINB13Q9UIV8 391 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 A0A0G2JND7 137 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 ANKRD65E5RJM6 399 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 UBE3CQ15386 1083 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 AGR3Q8TD06 166 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 CEP19Q96LK0 163 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 TTC1Q99614 292 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 SPZ1Q9BXG8 430 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 SAYSD1Q9NPB0 183 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 CAPN11Q9UMQ6 739 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 PDCD2Q16342 344 aaPredicted RBP19.52■□□□□ 0.72
SNX27-202ENST00000368841 ATXN7L3BQ96GX2 97 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.72
SNX27-202ENST00000368841 WDR17Q8IZU2 1322 aa19.52■□□□□ 0.71
SNX27-202ENST00000368841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.52■□□□□ 0.71
SNX27-202ENST00000368841 DRP2Q13474 957 aa19.52■□□□□ 0.71
SNX27-202ENST00000368841 TMEM206Q9H813 350 aa19.52■□□□□ 0.71
SNX27-202ENST00000368841 CDC23Q9UJX2 597 aa19.52■□□□□ 0.71
SNX27-202ENST00000368841 LEMD3Q9Y2U8 911 aa19.52■□□□□ 0.71
SNX27-202ENST00000368841 MXI1P50539 228 aa19.52■□□□□ 0.71
SNX27-202ENST00000368841 VCPP55072 806 aaKnown RBP19.52■□□□□ 0.71
SNX27-202ENST00000368841 SLC39A14Q15043 492 aa19.52■□□□□ 0.71
SNX27-202ENST00000368841 DALRD3Q5D0E6 543 aaKnown RBP19.52■□□□□ 0.71
SNX27-202ENST00000368841 RAPGEF5Q92565 580 aa19.52■□□□□ 0.71
SNX27-202ENST00000368841 IFT43Q96FT9 208 aa19.52■□□□□ 0.71
SNX27-202ENST00000368841 NFU1Q9UMS0 254 aa19.52■□□□□ 0.71
SNX27-202ENST00000368841 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 SNAP23O00161 211 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 GH2P01242 217 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 RNF219Q5W0B1 726 aaPredicted RBP19.51■□□□□ 0.71
SNX27-202ENST00000368841 FLAD1Q8NFF5 587 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 RBBP7Q16576 425 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 CATSPER4Q7RTX7 472 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 NLGN1Q8N2Q7 840 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 DHTKD1Q96HY7 919 aaPredicted RBP19.51■□□□□ 0.71
SNX27-202ENST00000368841 SKIV2LQ15477 1246 aaKnown RBP19.51■□□□□ 0.71
SNX27-202ENST00000368841 SYNDIG1Q9H7V2 258 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 HSPA4LO95757 839 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 SERPING1P05155 500 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 POLE2P56282 527 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 N4BP2L2Q92802 583 aaPredicted RBP19.51■□□□□ 0.71
SNX27-202ENST00000368841 TRAIPQ9BWF2 469 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 EDEM3Q9BZQ6 932 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 KIF23Q02241 960 aaPredicted RBP19.51■□□□□ 0.71
SNX27-202ENST00000368841 TRIM11Q96F44 468 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 RUNDC3BQ96NL0 473 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 STK17AQ9UEE5 414 aa19.51■□□□□ 0.71
SNX27-202ENST00000368841 POTEMA6NI47 508 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 EIF3CLB5ME19 914 aaKnown RBP19.5■□□□□ 0.71
SNX27-202ENST00000368841 EIF3CQ99613 913 aaKnown RBP19.5■□□□□ 0.71
SNX27-202ENST00000368841 FSD1LQ9BXM9 530 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 MOCS2O96007 188 aaPredicted RBP19.5■□□□□ 0.71
SNX27-202ENST00000368841 STAT3P40763 770 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 BLVRAP53004 296 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 BHMT2Q9H2M3 363 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 DENND3A2RUS2 1198 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 NEMP1O14524 444 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 EEF1DP29692 281 aaKnown RBP19.5■□□□□ 0.71
SNX27-202ENST00000368841 ARID5BQ14865 1188 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 CC2D2BQ6DHV5 1058 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 TOGARAM2Q6ZUX3 1019 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 RHPN2Q8IUC4 686 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 SLC8A2Q9UPR5 921 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 ADORA2BP29275 332 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 NR1H4Q96RI1 486 aaPredicted RBP19.5■□□□□ 0.71
SNX27-202ENST00000368841 ZMYND12Q9H0C1 365 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 FBXL5Q9UKA1 691 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 IREB2P48200 963 aaKnown RBP19.5■□□□□ 0.71
SNX27-202ENST00000368841 KLHL29Q96CT2 875 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 WDR11Q9BZH6 1224 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 KANSL2Q9H9L4 492 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 K7ERI5 159 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 ANP32DO95626 131 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 RASSF3Q86WH2 238 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 FAM213AQ9BRX8 229 aa19.5■□□□□ 0.71
SNX27-202ENST00000368841 ZNF233A6NK53 670 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 EPHB4P54760 987 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 GFPT1Q06210 699 aaPredicted RBP19.49■□□□□ 0.71
SNX27-202ENST00000368841 TBCCQ15814 346 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 MRPL47Q9HD33 250 aaKnown RBP19.49■□□□□ 0.71
SNX27-202ENST00000368841 ATP10DQ9P241 1426 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 PLXNC1O60486 1568 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 CYFIP1Q7L576 1253 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 KLHL8Q9P2G9 620 aaPredicted RBP19.49■□□□□ 0.71
SNX27-202ENST00000368841 RWDD2AQ9UIY3 292 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 AP1B1Q10567 949 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 GLE1Q53GS7 698 aaKnown RBP19.49■□□□□ 0.71
SNX27-202ENST00000368841 SUSD4Q5VX71 490 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 OTULINQ96BN8 352 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 PALMO75781 387 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 PSMD2Q13200 908 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 PCSK1NQ9UHG2 260 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 LAD1O00515 517 aa19.49■□□□□ 0.71
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